PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H00570.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bZIP
Protein Properties Length: 176aa    MW: 20701 Da    PI: 6.3947
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H00570.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.61.8e-1579129555
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                       +++rr+++NRe+ArrsR RK++ ++eL   v  L +eN++L ++l++ ++ 
  Migut.H00570.1.p  79 RKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLVDKLNHFSER 129
                       689******************************************998775 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.4E-1475139IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.73777140IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-1379129No hitNo description
PfamPF001703.8E-1379128IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.8E-1379152No hitNo description
CDDcd147023.15E-1980131No hitNo description
PROSITE patternPS0003608297IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MQPSDVSELH YLCLSNPTQF PTHFSLNTNI APPYQFSRFP NPLYQPHTTP QFQEFNPQLS  60
SNSTSDEADE QQLSIINERK QRRMISNRES ARRSRMRKQK HLDELWSQVV WLRNENHQLV  120
DKLNHFSERH DRVVQENAQL KEEASELRQM LTGMQLNSPY PILRELDDDP CNNLA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19198RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00389DAPTransfer from AT3G30530Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H00570.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012852121.11e-127PREDICTED: basic leucine zipper 43-like
SwissprotQ9FMC21e-44BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A022RW261e-111A0A022RW26_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.H00570.1.p1e-126(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9472492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.12e-54basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]