PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.G01330.1.p
Common NameMIMGU_mgv1a020432mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family FAR1
Protein Properties Length: 293aa    MW: 33560 Da    PI: 9.3959
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.G01330.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR175.41.1e-2312102290
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                       fY +YA++vGF +rk++++ s+ ++  +  +++ s+e +++++++  t++++++++et++gCka++ v++++ ++kw+vt++++ HnHel 
  Migut.G01330.1.p  12 FYTRYARRVGFGIRKNHKRLSQSDKLLIGVDYTFSREEQPKQSNEGkTKSSKTNQSETKIGCKAMMSVSLRReEEKWVVTRFVTYHNHELY 102
                       9********************************999999888777635777789999**************99****************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.4E-2112102IPR004330FAR1 DNA binding domain
PfamPF105513.6E-21224292IPR018289MULE transposase domain
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MVFDNPEDAQ TFYTRYARRV GFGIRKNHKR LSQSDKLLIG VDYTFSREEQ PKQSNEGKTK  60
SSKTNQSETK IGCKAMMSVS LRREEEKWVV TRFVTYHNHE LYTPRTTSLL RGHRKITPAQ  120
KNLINVLNES GIPATKIMSV LSHGSGGESN VGCALIDVQN HIGNKRRELL KEGDAQRMHN  180
YFMECQSKNP GFVYSIQLDD NNRMGNFFWA NTRSRLAYQY FGDVVTFDAT YLTNHYSMPF  240
VPFTGVNHHH QSVMFGCALL VNETTSSYVW LLRTWLEAMF GRASSVIIID ED*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.G01330.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012833069.10.0PREDICTED: protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A022RKY70.0A0A022RKY7_ERYGU; Uncharacterized protein
STRINGMigut.G01330.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43522109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-71FAR1-related sequence 5