PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.G00125.1.p
Common NameMIMGU_mgv1a023814mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 262aa    MW: 29388.2 Da    PI: 5.1361
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.G00125.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.42.4e-2076126155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+G+r+++ +g+W+AeIrdp++     r++lg+f +ae+Aa+a+++a+k+++g
  Migut.G00125.1.p  76 STYRGIRQRP-WGKWAAEIRDPKK---GVRVWLGTFNSAEQAARAYDEAAKRIRG 126
                       56********.**********954...4************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.18E-3276135No hitNo description
SuperFamilySSF541713.4E-2276135IPR016177DNA-binding domain
PROSITE profilePS5103223.94777134IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.5E-3277135IPR001471AP2/ERF domain
SMARTSM003804.9E-3777140IPR001471AP2/ERF domain
PfamPF008478.0E-1477126IPR001471AP2/ERF domain
PRINTSPR003674.2E-117889IPR001471AP2/ERF domain
PRINTSPR003674.2E-11100116IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008219Biological Processcell death
GO:0009723Biological Processresponse to ethylene
GO:0009735Biological Processresponse to cytokinin
GO:0009753Biological Processresponse to jasmonic acid
GO:0010286Biological Processheat acclimation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0051707Biological Processresponse to other organism
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MCGGSIISDE PIIKRRGKLT TEELWAELDT ISHFWGFDFS DDAAKNQPEP ASQKPGPHNK  60
GNKEKEEKGK ERGRKSTYRG IRQRPWGKWA AEIRDPKKGV RVWLGTFNSA EQAARAYDEA  120
AKRIRGDKAK LNFPAIHQPP TPPQQPPPKK IRVVPEPQSK PSQVVMDCER QGAEPCYLKG  180
CEPIKDELSS WESLLGFELA AEPSQVIMEP IKDELSSWES FLGLEPAVEP SPFGVLDETL  240
DSVDLWMMDE FAAAQQNNLF F*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A6e-2278134360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00109PBMTransfer from AT3G16770Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.G00125.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012828521.10.0PREDICTED: ethylene-responsive transcription factor RAP2-3-like
TrEMBLA0A022RVI61e-166A0A022RVI6_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.16e-45ethylene-responsive element binding protein