PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.G00084.1.p
Common NameLOC105976331, MIMGU_mgv1a011956mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 266aa    MW: 30061 Da    PI: 5.8156
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.G00084.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.22.8e-2076126155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+G+r+++ +g+W+AeIrdp++     r++lg+f +ae+Aa+a+++a+k+++g
  Migut.G00084.1.p  76 STYRGIRQRP-WGKWAAEIRDPKK---GVRVWLGTFNSAEQAARAYDQAAKRIRG 126
                       56********.**********954...4************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.84E-3276136No hitNo description
SuperFamilySSF541712.29E-2276136IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.105.8E-3277135IPR001471AP2/ERF domain
SMARTSM003801.8E-3777140IPR001471AP2/ERF domain
PfamPF008479.3E-1477126IPR001471AP2/ERF domain
PROSITE profilePS5103223.93377134IPR001471AP2/ERF domain
PRINTSPR003674.3E-117889IPR001471AP2/ERF domain
PRINTSPR003674.3E-11100116IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MCGGSIISDE PIIKRRGKLT TEEFWAELDT ISHFWGFDFS DDAAKNQPEP DAQKPGPHNK  60
GKKEKEEKGK ERGRKSTYRG IRQRPWGKWA AEIRDPKKGV RVWLGTFNSA EQAARAYDQA  120
AKRIRGDKAK LNFPANHEPP TPPQQPPPKK IRVVPEPQSK PSQVVMDCER QGAEPCYLKG  180
CEPIKDELSS WESLLGLEEP NQVIMEPSQV IMEPIKDELS SWESFLGLEP AVKPSPFGVL  240
DETMDSVDFW MMHEFAAAQQ NNLFF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-2278134360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.G00084.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012857056.10.0PREDICTED: ethylene-responsive transcription factor RAP2-3-like
TrEMBLA0A022Q3E40.0A0A022Q3E4_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.11e-40ethylene-responsive element binding protein