PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F00809.1.p
Common NameLOC105977484, MIMGU_mgv1a023259mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 241aa    MW: 26680.1 Da    PI: 4.645
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F00809.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.35.3e-2080130356
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                       y+GVr+++ +g+++AeIrd s+++ + r++lg+f+taeeAa a+++a+ +++ge
  Migut.F00809.1.p  80 YRGVRRRP-WGKFAAEIRD-STRN-SVRVWLGTFDTAEEAALAYDQAAFAMRGE 130
                       9*******.**********.3433.6**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003805.1E-3579143IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-3079138IPR001471AP2/ERF domain
PROSITE profilePS5103223.45979137IPR001471AP2/ERF domain
SuperFamilySSF541714.45E-2379139IPR016177DNA-binding domain
PRINTSPR003673.1E-118091IPR001471AP2/ERF domain
PfamPF008473.9E-1580130IPR001471AP2/ERF domain
CDDcd000184.81E-2880138No hitNo description
PRINTSPR003673.1E-11103119IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MEYSGGSSFS AFSYSDQQYL PFNENDSQEM LLYGVLAEGG AAAVTPESSA NSSNGNYDQC  60
RWGEEEEEEG RSREVSAAAY RGVRRRPWGK FAAEIRDSTR NSVRVWLGTF DTAEEAALAY  120
DQAAFAMRGE AAVLNFPAEV VWESMRQMGY NGGGGGNGME AEECSPVLAL KKMHSTQRKS  180
ASRSKKKKHI INHHQQNMEN NNNNNNNNYN NNMVVLEDLG SDYLEELLSL SESSTTTPHW  240
*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-2967139274Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F00809.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012858241.11e-179PREDICTED: ethylene-responsive transcription factor 1B-like
TrEMBLA0A022Q0511e-178A0A022Q051_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.17e-35ethylene response factor 1