PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F00526.1.p
Common NameMIMGU_mgv1a020446mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 225aa    MW: 24510.5 Da    PI: 5.4184
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F00526.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.56.2e-17138187355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       y+GVr+++ +g+++AeIrdp+    +  r++lg+++   +Aa+a++ a+ k++g
  Migut.F00526.1.p 138 YRGVRRRP-WGKYAAEIRDPVR---KgSRVWLGTYDNDVDAARAYDCAAFKMRG 187
                       9*******.**********643...24**********99*************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.87E-29137195No hitNo description
PROSITE profilePS5103223.802137195IPR001471AP2/ERF domain
PfamPF008477.8E-12137187IPR001471AP2/ERF domain
SMARTSM003801.0E-34137201IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.4E-30137196IPR001471AP2/ERF domain
SuperFamilySSF541713.47E-22137197IPR016177DNA-binding domain
PRINTSPR003672.4E-13138149IPR001471AP2/ERF domain
PRINTSPR003672.4E-13177197IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MANPGECLTL ELIRQHLLEE FTSTESFLDS LNLCFSDVFS DNPVCTAGET GSPSSSYSDP  60
NQPGLLLQPA VSVDPDFQPD FFEVEMKPQT ISIITCGKDS ATEDSLTPAK PMKPEPEYGF  120
TFGPDPNTVS VARGGRNYRG VRRRPWGKYA AEIRDPVRKG SRVWLGTYDN DVDAARAYDC  180
AAFKMRGSKA ILNFPMDAGK SGPPVGSGRK RRRTEKSQGS TTVL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-26135196364ATERF1
3gcc_A1e-26135196364ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1208212RKRRR
2208213RKRRRT
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F00526.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012858579.11e-166PREDICTED: ethylene-responsive transcription factor ERF106
TrEMBLA0A022PWJ91e-160A0A022PWJ9_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.12e-32ERF family protein