PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00205.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 367aa    MW: 39872.7 Da    PI: 9.6242
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00205.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.1e-1852102256
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                       +y+GVr+++ +gr++AeIrdp++   + r +lg+f+taeeAa a++ a+++++g+
  Migut.E00205.1.p  52 RYRGVRRRP-WGRYAAEIRDPNS---KERRWLGTFDTAEEAACAYDTAARAMRGA 102
                       59*******.**********832...4999**********************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.6E-1152101IPR001471AP2/ERF domain
PROSITE profilePS5103222.20752109IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.1E-3052108IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-2152109IPR016177DNA-binding domain
SMARTSM003809.6E-3352115IPR001471AP2/ERF domain
CDDcd000182.38E-3052108No hitNo description
PRINTSPR003672.0E-95364IPR001471AP2/ERF domain
PRINTSPR003672.0E-97591IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MEQALIRRTH NHRTSIADHP TTAATKRCYT TTNKRPLKKE DPPPPPSGGG IRYRGVRRRP  60
WGRYAAEIRD PNSKERRWLG TFDTAEEAAC AYDTAARAMR GAKARTNFLY PMSTNHPATT  120
DQNLVPSFSY GKSSQPSIFG TRHVAPSSSP FAANPNLDFT VSSLMKSNNS LDITTCSFMG  180
SSSSSSMYIN PSCNTTTAQP ATPMNAAAGV SEVFTNGVSS STGGETDCMG FFHTERSNSG  240
LLQEVLNGFF PGYSKAAPPA DSFAPPPPVA ALAEVKTSCL STDNYCQIVA PRLNYTRDFF  300
EGQVLTRQGS MTKHNCLCSP TTHVGSFRCR LHRLPSLNRT KSIDDDSAKV IVSYNLTAEP  360
KISKKQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-19521081471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00205.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012855172.10.0PREDICTED: ethylene-responsive transcription factor LEP-like
TrEMBLA0A022Q4J30.0A0A022Q4J3_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.16e-16DORNROSCHEN-like