PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D00419.1.p
Common NameLOC105956567, MIMGU_mgv1a020609mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 166aa    MW: 18398.1 Da    PI: 5.8592
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D00419.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.2e-201667256
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                      +y+G+r+++ +g+++AeIrdp+ ng  +r +lg+f taeeAa+a+++a+ +l+g+
  Migut.D00419.1.p 16 KYRGIRRRP-WGKFAAEIRDPNRNG--ARLWLGTFETAEEAARAYDRAAYALRGH 67
                      8********.**********96665..**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.0E-141667IPR001471AP2/ERF domain
CDDcd000181.26E-181676No hitNo description
Gene3DG3DSA:3.30.730.102.8E-321675IPR001471AP2/ERF domain
PROSITE profilePS5103225.0271674IPR001471AP2/ERF domain
SMARTSM003801.1E-331680IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-231675IPR016177DNA-binding domain
PRINTSPR003671.9E-111728IPR001471AP2/ERF domain
PRINTSPR003671.9E-114056IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
MEASKGGGGG GQREVKYRGI RRRPWGKFAA EIRDPNRNGA RLWLGTFETA EEAARAYDRA  60
AYALRGHQAI LNFPNDGHYR NTPAESSSRL APSGSIANTR GRPPQAALRY EPSPEYAGEE  120
VGPSRGAGEE VIELEYYDNK LLDDLLSTQF QEDDCNYKRS SDNNW*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-29576374Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D00419.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012835876.11e-118PREDICTED: ethylene-responsive transcription factor ERF098-like
SwissprotQ9LTC57e-38ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A022S2A81e-117A0A022S2A8_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.17e-30ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]