PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D00418.1.p
Common NameLOC105956577, MIMGU_mgv1a019154mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 160aa    MW: 17549.2 Da    PI: 6.5191
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D00418.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.7e-202878255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +++GVr+++ +g+++AeIrd+++    +r++lg+f taeeAa+a++ a+  ++g
  Migut.D00418.1.p 28 KFRGVRRRP-WGKFAAEIRDCNNH--GARVWLGTFATAEEAARAYDLAAYTMRG 78
                      89*******.**********7443..3*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.83E-222887IPR016177DNA-binding domain
CDDcd000184.07E-272887No hitNo description
PROSITE profilePS5103223.1172886IPR001471AP2/ERF domain
PfamPF008472.4E-152878IPR001471AP2/ERF domain
SMARTSM003802.3E-332892IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-302888IPR001471AP2/ERF domain
PRINTSPR003676.1E-112940IPR001471AP2/ERF domain
PRINTSPR003676.1E-115268IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MEGNSKDRAA AAKEDKDGGG GGGGEGVKFR GVRRRPWGKF AAEIRDCNNH GARVWLGTFA  60
TAEEAARAYD LAAYTMRGSM AVLNFPEEYS FFTNTSNNCH SSTTTTSALS TSALSTSASS  120
SSEQRKEVFE FEYYDNKLLE DLLEFGEKRN HYASAFHWK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-35181384114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D00418.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012835886.11e-114PREDICTED: ethylene-responsive transcription factor ERF096-like
SwissprotQ9LTC54e-38ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A022S5441e-113A0A022S544_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G04370.12e-19Ethylene-responsive element binding factor 14
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]