PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.C00675.1.p
Common NameLOC105965619, MIMGU_mgv1a003541mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family TALE
Protein Properties Length: 580aa    MW: 63942.2 Da    PI: 8.4653
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.C00675.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox30.65.8e-104094461954
                       HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
          Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                       Fe   n+yps++++  L++++gL+++qV++WF N R +
  Migut.C00675.1.p 409 FEHflNPYPSEADKHLLSRQTGLSKNQVSNWFINARVR 446
                       665569******************************88 PP

2BELL102.33.4e-33264336172
              BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgs.akpYtslAlkaiSrhFrcLkdaiaeqi 72 
                       er e q++k kLl++l+eVd rY +y+eq+q+v++sFe ++g  + a+pYt+lA +a+SrhFrc+kdai++q+
  Migut.C00675.1.p 264 ERSEFQRRKIKLLTMLDEVDARYTRYCEQMQAVVNSFESAVGQAAaAAPYTTLARRAMSRHFRCIKDAIVGQL 336
                       789**************************************9865278**********************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005746.0E-45181334IPR006563POX domain
PfamPF075262.4E-43187333IPR006563POX domain
PROSITE profilePS5007112.503387450IPR001356Homeobox domain
CDDcd000862.28E-12390451No hitNo description
SMARTSM003892.0E-9390454IPR001356Homeobox domain
SuperFamilySSF466891.33E-17391458IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.2E-28393456IPR009057Homeodomain-like
PfamPF059205.6E-18407446IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 580 aa     Download sequence    Send to blast
MLRAQGGFDP PHPPPDSTAL PPVYDAGGML TEIINLVPPP DHQIQSNNYR WPHQKHHQHL  60
SAAAAVNELS FMNNNHHITD NSASSPPYNN TNNNQLQGFH LLSPAVVGPT AAMEPPWVHH  120
HTTTRSRMVE GQALSLSLSS SLRNNIEEAA KMYNFHNQDL GANNPESIFN NHFGMFESSS  180
SSANSSLRSS RYLRAGQELL GEFCCVVSIG AAQSNSRGKK FKNAVQGRNP NNNNNNNNSI  240
GGGDFATDPS SASKDVHRPI SPAERSEFQR RKIKLLTMLD EVDARYTRYC EQMQAVVNSF  300
ESAVGQAAAA APYTTLARRA MSRHFRCIKD AIVGQLKQTC EGLGEKDFLG GGGGGGGLTK  360
GETPRLKMLE QKYRQQKAMQ HIGMMDPDTW RPQRGLPERS VNILRAWLFE HFLNPYPSEA  420
DKHLLSRQTG LSKNQVSNWF INARVRLWKP MVEEMYQQEL QDHEVQPSTA QEPKQDASTS  480
MISTTTTTAG PSSSLTPTHN AASALQENDP SLNHTVRYRG KNPAGGAGPQ PPEYRYFMTR  540
DAAEAGVGGG DVSLTLGLRH SENHVPRMSR LSIRDFEAY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A9e-16396454563Homeobox protein Meis2
3k2a_B9e-16396454563Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012845643.10.0PREDICTED: BEL1-like homeodomain protein 4
SwissprotQ94KL51e-115BLH4_ARATH; BEL1-like homeodomain protein 4
TrEMBLA0A022RYG50.0A0A022RYG5_ERYGU; Uncharacterized protein
STRINGSolyc04g079830.2.11e-148(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA60721721
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23760.33e-82BEL1-like homeodomain 4