PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.C00214.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bZIP
Protein Properties Length: 361aa    MW: 40841.5 Da    PI: 6.4103
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.C00214.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.21.3e-1177105533
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                       k++rr+++NReAAr+sR+RKka++++Le 
  Migut.C00214.1.p  77 KNQRRLAQNREAARKSRLRKKAYVQQLES 105
                       99*************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.001973133IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.95675112IPR004827Basic-leucine zipper domain
PfamPF001701.1E-777106IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.35E-777127No hitNo description
Gene3DG3DSA:1.20.5.1707.2E-877124No hitNo description
PROSITE patternPS0003608095IPR004827Basic-leucine zipper domain
PfamPF141448.1E-27162236IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MTTPTTQFAP SSRMSLYEPL HQISMWEDAF DGDISPRTGV CLINDSDEKL DDKAEYTSDK  60
SIELIEDGHA SRGISEKNQR RLAQNREAAR KSRLRKKAYV QQLESSRLKL AQLELEIERA  120
RQQGMLIANA NASMGLCSPV NSGLGAFEME YGHWIEEQER KISELKNVLQ SPIGDVELRM  180
MVENMLNHYC NLFRMKKDAA RIDAFYLVSG MWRSSVERFF LWIGGFRPSE LINVVMPQLE  240
PLTDQQIANV GKLKHCCIQA EDALSQGMDK LQQTLAQSIT FLAPAPGNYC SQTASALENL  300
ESLESFVHQA DHLREQTLQQ MSRILTTRQA AKGLLAFGEY FQRLRALSSL WSARSPRETV  360
*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.C00214.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012829825.10.0PREDICTED: transcription factor TGA4-like isoform X2
SwissprotQ391621e-142TGA4_ARATH; Transcription factor TGA4
TrEMBLA0A022RX730.0A0A022RX73_ERYGU; Uncharacterized protein
STRINGMigut.C00214.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7802497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10030.21e-137TGACG motif-binding factor 4
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Canales J,Contreras-López O,Álvarez JM,Gutiérrez RA
    Nitrate induction of root hair density is mediated by TGA1/TGA4 and CPC transcription factors in Arabidopsis thaliana.
    Plant J., 2017. 92(2): p. 305-316
    [PMID:28771873]