PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B01912.1.p
Common NameMIMGU_mgv1a007575mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 404aa    MW: 44345.1 Da    PI: 7.5519
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B01912.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.91.8e-13240286354
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       ++h e+Er+RR+++N++f  Lr+++P+       +++Ka+ L  Av YIk+L
  Migut.B01912.1.p 240 MNHVEAERQRREKLNHRFYALRSVVPNV-----SRMDKASLLSDAVSYIKEL 286
                       589************************6.....4****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142153.0E-113586IPR025610Transcription factor MYC/MYB N-terminal
PfamPF142152.7E-1993169IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088817.739237286IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.31E-15240290No hitNo description
SuperFamilySSF474591.11E-17240295IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.2E-11241286IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-16241297IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-16243292IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MDELILSSCS KSSSSYSVNM MCSNDERQPP TISVLQKKLK HLLQTQTDFW SYAIFWQSCS  60
SSTSNVLNWG DGYFQGTANY SNETTKKLAV DEHGGGVVGK AFNSGSLVWL TGGNQLKLYN  120
CERAKQAEAH GMQTMVCIPT ATPRGVVELA SHLIIHENWT LLQQVQHTFP AFAFQPEIIM  180
DSDSDCPTTT TDNNTNTNIN KKRAPMASSS TAATTGIISG GKKRGRKPAG PRGPDALPTM  240
NHVEAERQRR EKLNHRFYAL RSVVPNVSRM DKASLLSDAV SYIKELKSRL DDLQTNNVNK  300
LLSSSSSVVK TETDDDDEPI ISSSSLVEVK MVGVDGMIRV QSEKSNYPSA RLMDAIRDLK  360
LEIQHASMSC VNNIMIQDVV VTLPSDGPLT SENALRTALL HRL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5gnj_A4e-21240290757Transcription factor MYC2
5gnj_B4e-21240290757Transcription factor MYC2
5gnj_E4e-21240290757Transcription factor MYC2
5gnj_F4e-21240290757Transcription factor MYC2
5gnj_G4e-21240290757Transcription factor MYC2
5gnj_I4e-21240290757Transcription factor MYC2
5gnj_M4e-21240290757Transcription factor MYC2
5gnj_N4e-21240290757Transcription factor MYC2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B01912.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012843895.10.0PREDICTED: transcription factor MYC4
TrEMBLA0A022QXF70.0A0A022QXF7_ERYGU; Uncharacterized protein
STRINGMigut.B01912.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10722185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00870.12e-48bHLH family protein