PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B01126.1.p
Common NameMIMGU_mgv1a025010mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family FAR1
Protein Properties Length: 660aa    MW: 75855.9 Da    PI: 8.8986
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B01126.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR172.21.1e-2212100288
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 
                       fY +Y + vGF +rk++++ s+ ++  +  +++Cs+e +++++++  t++++++++et++gCka++ v++++ ++kw+vt+++++HnH+
  Migut.B01126.1.p  12 FYMRYVRCVGFGIRKNHTRLSQSDKLLIGVDYTCSREWQPKQSNEGkTKSSKTNQSETKIGCKAMMSVSLRReEEKWVVTRFVTDHNHH 100
                       9************************************99888777636777789999**************99**************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031017.5E-2112100IPR004330FAR1 DNA binding domain
PfamPF105511.3E-25203290IPR018289MULE transposase domain
Sequence ? help Back to Top
Protein Sequence    Length: 660 aa     Download sequence    Send to blast
MVFDKPEDAQ TFYMRYVRCV GFGIRKNHTR LSQSDKLLIG VDYTCSREWQ PKQSNEGKTK  60
SSKTNQSETK IGCKAMMSVS LRREEEKWVV TRFVTDHNHH ELYTPRTTSL LRGHINITPA  120
QKNLINVLNE AGIPATKIMS VLSHGSGGET NVGCALIDVQ NHIVSIKNPG FVYSIQLDDN  180
NRMGNCFWAD TRSQLAYQYF GDVVAFDTTY LTNRYSMPFV PFTEVHHHHQ SVMFGCALLV  240
NVKPSSYVWL LRTWIEAMFG RAPSVIITDE DKSMRAAIAE VLPSTSHRLS HVFNKYPSFQ  300
GEFHHCIHDT MTTQEFEHEW TDLIQKYGLH ENEWLTMLYG QREQWIPAYL QSMFCAGMST  360
TQRSESMNKF FKGFVRSTLD ARYFKEKEKD LKTKNTKPVL KTCYKIEADA ADVYTRKLFL  420
MFQEELFSSK KYMSSKHCED GVKKCYLVML MGKEKPVYEV VLDPIEKNAI PSCHMFEFVG  480
ILCRYILAIF VKKSFVSSLL QQYILQRWTI NSKSRALQEN VDELKQEDSQ ISSTLRRNNL  540
LIQFLEVVEE GQKSQRKHDY LALALRTTHS ELLDLDDESN ETRIHGGSAI EKQPQHSGQQ  600
LSNMPVTLLD PAHVSSKGRS KSLRLKHLME SQSGKKRKCS ICKQTGHIKT SCSLHKQAS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B01126.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018806877.10.0PREDICTED: protein FAR1-RELATED SEQUENCE 5-like, partial
RefseqXP_018855508.10.0PREDICTED: protein FAR1-RELATED SEQUENCE 5-like, partial
TrEMBLA0A022QK370.0A0A022QK37_ERYGU; Uncharacterized protein
STRINGMigut.B01126.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43522109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-135FAR1-related sequence 5