PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.A00994.1.p
Common NameMIMGU_mgv1a022878mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 264aa    MW: 28580.1 Da    PI: 8.6275
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.A00994.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.8e-19133183255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ tae+Aa a+++a+ +++g
  Migut.A00994.1.p 133 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEDAAVAYDRAAYCMRG 183
                       8********.***********9987..*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.9E-32132191IPR001471AP2/ERF domain
CDDcd000181.03E-29132191No hitNo description
SMARTSM003807.5E-39133197IPR001471AP2/ERF domain
SuperFamilySSF541712.94E-23133193IPR016177DNA-binding domain
PfamPF008476.8E-13133183IPR001471AP2/ERF domain
PROSITE profilePS5103223.894133191IPR001471AP2/ERF domain
PRINTSPR003671.5E-10134145IPR001471AP2/ERF domain
PRINTSPR003671.5E-10157173IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MMYGKDEDYE ADLALLESIR RHLLDDSQLM INPLTFSNNI NGGIEAVVSS SLPQMASNPP  60
APKETNIYSD DIFRYGVFSG GATANIGWQP LLDAAPAIVK TETHFSFGNP ETILNFQAAA  120
PPMEVAAPHR GKHYRGVRQR PWGKFAAEIR DPAKNGARVW LGTYETAEDA AVAYDRAAYC  180
MRGSRALLNF PLRINSGEPA PVRVTAKRSA AAAASSDSSS SSNSENGLMR KRKAAAAETV  240
GRRGCKVGHK SGQVVEYKMS EWE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-41130198270ATERF1
3gcc_A7e-41130198270ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.A00994.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2089994e-45AC208999.1 Populus trichocarpa clone POP021-B12, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012842657.11e-154PREDICTED: ethylene-responsive transcription factor 2-like
TrEMBLA0A022QZH20.0A0A022QZH2_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.14e-45ethylene responsive element binding factor 1