PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.A00718.1.p
Common NameMIMGU_mgv1a024960mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 342aa    MW: 38175.4 Da    PI: 5.9694
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.A00718.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.94.8e-29156214259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       +D ++WrKYGqK++kgs+fprsYYrC+s+ gC ++k+ve s +dp  ++itY+ eH h+
  Migut.A00718.1.p 156 SDMWAWRKYGQKPIKGSPFPRSYYRCSSSkGCLARKQVEESCTDPGKFIITYTAEHSHS 214
                       79*************************998****************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-29141216IPR003657WRKY domain
SuperFamilySSF1182908.76E-25150216IPR003657WRKY domain
PROSITE profilePS5081131.732150216IPR003657WRKY domain
SMARTSM007742.2E-33155215IPR003657WRKY domain
PfamPF031067.2E-24157213IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MADQLVADME DWSLQAIVRG SSGDYAKIAD TEMDGHDSFF DNHDQFDPRE FLSSSAAGFP  60
EMFAGSSEEL QELYKPFYHP AAVTTTTTTS TSPPVHTGTV LDFQQDQKLQ NILEDDSKQK  120
LARVSPAAAA YTPKYKKRKN QHKRVVVQVS AEGLASDMWA WRKYGQKPIK GSPFPRSYYR  180
CSSSKGCLAR KQVEESCTDP GKFIITYTAE HSHSQPTRRN SLAGTVRQKF PSPSSKTTPN  240
NNISRPAKQD LKAADVAMSP PMKTLADDHH HEARIKEEMI NRQEKEGVVE EDGGDFMASD  300
FVFNEEFFSG LEDFDQFMAA ELPGCHATAQ QFPVRSCSSW F*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-16147216877Probable WRKY transcription factor 4
2lex_A2e-16147216877Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00448DAPTransfer from AT4G23550Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854209.10.0PREDICTED: probable WRKY transcription factor 29 isoform X1
TrEMBLA0A022Q4310.0A0A022Q431_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57812335
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23550.13e-50WRKY family protein