PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.17G092600.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family Trihelix
Protein Properties Length: 313aa    MW: 35723.1 Da    PI: 8.8616
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.17G092600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix61.12.6e-1943131286
             trihelix   2 WtkqevlaLiearremeerlrr......gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                          Wt qe+l+Li+a++ ++er ++      +k  + +W++v ++++++g+ rs++qC++kw+nl ++ykk++e +++   ++s + p +  +
  Manes.17G092600.1.p  43 WTIQETLTLITAKKLDDERRSKpsipstSKPGELRWKWVENYCWAHGCFRSQNQCNDKWDNLLRDYKKVREYQSRS--NASDSSPSYWTM 130
                          **************88888885333333678899***************************************995..555567888888 PP

             trihelix  86 e 86 
                          +
  Manes.17G092600.1.p 131 D 131
                          7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.24835105IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.605.9E-535107IPR009057Homeodomain-like
PfamPF138375.5E-1542132No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MSQPPTPIPQ TLPPIPPPLP PPQPQLQPPA LLPANREYRK GNWTIQETLT LITAKKLDDE  60
RRSKPSIPST SKPGELRWKW VENYCWAHGC FRSQNQCNDK WDNLLRDYKK VREYQSRSNA  120
SDSSPSYWTM DRQQRKFYNL PSNMSPDVFE ALNEVVQRRY HNIPQSLPPS QQQHQHQQQE  180
QQQQLSVAVA ASPPPETTRE SLPEPVMDLP AVSEGSESSA TESSDKLDTG TKRRKVRNIG  240
ASIKHSASIL AQTIRNCEEK KDKRHQEMME IEQRRLQLEE ARNEVNREGM ANLAMAVTKL  300
STAIQSLISD QT*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.17G092600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021599061.10.0trihelix transcription factor ASR3-like
TrEMBLA0A2C9U6B60.0A0A2C9U6B6_MANES; Uncharacterized protein
STRINGcassava4.1_022367m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68043242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.16e-49Trihelix family protein