PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.15G145300.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family B3
Protein Properties Length: 368aa    MW: 42180.9 Da    PI: 5.1167
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.15G145300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.57.3e-1132116396
                          EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                   B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                          kv     + + + l lp kfa+++g +   s   +l  ++g  Wev l  + k+++++l +GW+e v+   ++ g f+ F + g s+f  
  Manes.15G145300.1.p  32 KVR--TTTIEDKKLNLPLKFARKFGDE--LSDVAKLIVPNGLIWEVGL--T-KGETIWLDNGWQELVEYYSVCNGWFLQFNYLGMSNF-- 112
                          444..455666779**********865..7889***************..5.55799*************************998888.. PP

                          EEEE CS
                   B3  93 vvkv 96 
                          ++ +
  Manes.15G145300.1.p 113 NIFI 116
                          5555 PP

2B341.23e-13276362997
                          HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                   B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                          ++ ++++l +p  fa ++  +   s t+++ed  g +W +   ++ ++g+  vl++G +eF ++n+++ gD+++F+l+++++  l+v vf
  Manes.15G145300.1.p 276 SYIRTNLLHVPSAFAVKYLRN--ISETIKVEDCYGGEWIIHT-FCSCRGWsLVLRGGGEEFFSDNDMQNGDVCLFELIQERDVVLKVLVF 362
                          5667889***********655..6779************999.77777778***************************998888888887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019363.53E-1325127IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.3E-1427119IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086310.15128120IPR003340B3 DNA binding domain
SMARTSM010191.6E-529120IPR003340B3 DNA binding domain
CDDcd100174.38E-829118No hitNo description
Gene3DG3DSA:2.40.330.103.5E-17261363IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019364.51E-16263363IPR015300DNA-binding pseudobarrel domain
CDDcd100174.71E-12267362No hitNo description
PROSITE profilePS508639.925268365IPR003340B3 DNA binding domain
SMARTSM010196.3E-5269365IPR003340B3 DNA binding domain
PfamPF023622.3E-11274362IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: