PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.09G146100.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 201aa    MW: 21356.5 Da    PI: 4.859
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.09G146100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.4e-193281255
                  AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                          y+GVr++  +g+WvAeIr+p   + r  r++lg+f t  eAaka+++a++kl+g
  Manes.09G146100.1.p 32 TYRGVRQRT-WGKWVAEIREP---N-RgNRIWLGTFNTSHEAAKAYDQAALKLYG 81
                         69****999.**********8...2.359***********************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.90E-303189No hitNo description
PfamPF008471.6E-143281IPR001471AP2/ERF domain
SMARTSM003807.7E-343295IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-303290IPR001471AP2/ERF domain
PROSITE profilePS5103222.6953289IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-213290IPR016177DNA-binding domain
PRINTSPR003672.4E-103344IPR001471AP2/ERF domain
PRINTSPR003672.4E-105571IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
MEQEAKDTNQ SMRRSRKGCM KGKGGPENAL CTYRGVRQRT WGKWVAEIRE PNRGNRIWLG  60
TFNTSHEAAK AYDQAALKLY GSSATLNLPQ YCHTAAAAPA NTLSTECQEL GNGIETAASF  120
SSQAVQELGN GAGTCCSSGE MGTAASFSSQ PDSGSVEGGN IMHWPEFGIE TEFLGSCDVG  180
IATVGGEGLN WDGYPEQWSI *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-183389663ATERF1
3gcc_A1e-183389663ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00519DAPTransfer from AT5G18450Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.09G146100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021621955.11e-148dehydration-responsive element-binding protein 2G-like
TrEMBLA0A2C9VCB81e-146A0A2C9VCB8_MANES; Uncharacterized protein
STRINGcassava4.1_029523m1e-147(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF25623380
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18450.16e-42ERF family protein