PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.03G192400.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 332aa    MW: 37005.6 Da    PI: 5.1595
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.03G192400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.3e-174896355
                  AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         + GVr+++ +gr++AeIrdp++   + r++lg+f+ta+eAa a+++a+++++g
  Manes.03G192400.1.p 48 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 96
                         56******.**********965...5***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.1E-3047110IPR001471AP2/ERF domain
CDDcd000181.34E-2747103No hitNo description
PROSITE profilePS5103220.48147104IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-2748103IPR001471AP2/ERF domain
PRINTSPR003671.2E-74859IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-2048104IPR016177DNA-binding domain
PfamPF008473.9E-115096IPR001471AP2/ERF domain
PRINTSPR003671.2E-77086IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MSTSQTFEKP LYEPVKIHGG YALIQRNTSP PQTGERRGRR KQPEPGRFLG VRRRPWGRYA  60
AEIRDPTTKE RHWLGTFDTA QEAALAYDRA ALSMKGIQAR TNFLYTDHGT FHSLLTPFDD  120
VQLQPFFPPS QFFTAIPQAQ GNKPTNQNNN PPKYETCLNE SPNQSSGETT ESACDNNFFF  180
SHDDSNNSGY LSCIVPDNCL RPPSDPSSTN SKTNNYKAPS DHHQNFSSMI TTTSIEHAFP  240
PDTTTRSYPC FDELNSGFWG DDQKPWEFNS DELSAMINNN ALMAGDVCME TFYPSTSNIP  300
SYGSVPQATP SVSSCTPSYG DIVDFSYASL F*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-1938103571Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.03G192400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021606108.10.0ethylene-responsive transcription factor ERF086
TrEMBLA0A2C9W9040.0A0A2C9W904_MANES; Uncharacterized protein
STRINGcassava4.1_027221m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF57843351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.14e-48ERF family protein