PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.02G194200.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family TCP
Protein Properties Length: 426aa    MW: 45005.6 Da    PI: 8.5014
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.02G194200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP127.81.1e-3990200289
                  TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.. 88 
                          ++ k++++++hTkv+gR+RR+R++a+caar+F+L++eLG++ d++tieWLlqqa+pai+++tgt++++a+++  ++s +ss+ + s++  
  Manes.02G194200.1.p  90 PTTKRPSKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKYDGETIEWLLQQAEPAIIAATGTGTIPANFStLNVSLRSSGVTVSAPss 179
                          5789*****************************************************************999866666666654444422 PP

                  TCP  89 ....................k 89 
                                              +
  Manes.02G194200.1.p 180 ksaplhgglafydanngsenR 200
                          234444444444444444440 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.6E-3796231IPR005333Transcription factor, TCP
PROSITE profilePS5136928.04796150IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MVLMESQSSN QQNLNSSSSK DHHHGHKQES SAAASLQLVS FETQTSQLQQ RGSTAATTTI  60
SQGPFMGSIS NQITVHPSTS NSNSSALTKP TTKRPSKDRH TKVDGRGRRI RMPALCAARV  120
FQLTRELGHK YDGETIEWLL QQAEPAIIAA TGTGTIPANF STLNVSLRSS GVTVSAPSSK  180
SAPLHGGLAF YDANNGSENR RVIIGSNTPT LGFHHQPYPY HTLVSDENYI RKTHRDDLFK  240
ETTTTRQEST ETANPPSSNK PPVAAAARTG IEDHQEQGST RSSNILATPA MWAVAPAATN  300
GGNAFWMLPV GGATTTTTAA AIPEPQVWTF PAAGVTSMQR VSFRGGGRMS PVQLGSMMVH  360
QAVGGQQLGL GVGESNIGIL GGGGSGSGAN AYSSRFGLGM NLEQHNQQNQ QQGSDSDDEN  420
PTDSQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.02G194200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021603740.10.0transcription factor TCP23-like
SwissprotQ9LQF02e-76TCP23_ARATH; Transcription factor TCP23
TrEMBLA0A2C9WI200.0A0A2C9WI20_MANES; Uncharacterized protein
STRINGcassava4.1_024743m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF60773050
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35560.15e-63TCP family protein