PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000814798
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family AP2
Protein Properties Length: 76aa    MW: 8405.79 Da    PI: 4.8018
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000814798genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP221.75.2e-0712363155
            AP2 31 fslgkfgtaeeAakaaiaarkkleg 55
                   ++lg+++ +e Aa+a++ a++k++g
  MDP0000814798 12 VYLGTYDDEEAAARAYDPAALKYWG 36
                   89*********************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103211.561144IPR001471AP2/ERF domain
SMARTSM003803.9E-4450IPR001471AP2/ERF domain
SuperFamilySSF541711.37E-101146IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.7E-111244IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    Send to blast
MLAHDDSIYI PVYLGTYDDE EAAARAYDPA ALKYWGPGTL INFPVRLLSA DFILLIFIHL  60
KFHPFLVLGL ASIPN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-