PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000662999
Common NameBHLH11, LOC103454894
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bHLH
Protein Properties Length: 542aa    MW: 58571.9 Da    PI: 5.6974
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000662999genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.81.4e-11356398754
                    HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
            HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                    ++ErrRR+++N+++  Lr+++Pk +      K++ a+iL  A+eY+k+L
  MDP0000662999 356 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 398
                    79*********************66......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.58349398IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.96E-16352418IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.3E-9355398IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.3E-13355404IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-15356411IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.47E-13356402No hitNo description
CDDcd048732.59E-7470530No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 542 aa     Download sequence    Send to blast
MLPRLNGGVW MDDREDRDSV SWTRTSATAT AGNTENKDEM GSSLSTFKSM LEVEDDWYMA  60
ANNSIQGHSD VGDISFSPSF ADPESLLLNP VDSSSSCSPS SSVFNNLDPN QVHYYMPQNP  120
NLSSLLNVVP NNPLDHGFDL GCDIGFLDTQ ASGGGSSMMN RGGGVLSGFN DLSSNSQVNA  180
QNLGSNLQFS TTRMPQALEN SSNFSGFRGV DDGSANALFP NRPKLLRPLE SFPSVGVQPT  240
LFQKRAALRK NLGDGGGNLG VLXSQGGLVL NEGDERKREM GVQNEKKRKM SGXDDVDDLS  300
FDGSGLNYDS DEFTENTKVD DGAKNGGNSS NANSTVTGGG GGHKGKKKGL PAKNLMAERR  360
RRKKLNDRLY MLRSVVPKIS KMDRASILGD AIEYLKELLQ RINNLHNELE SIPPGSALTP  420
TGNTFHPLTP TPATLPNRIK EELCPSSLPS PNGQAARVEV RLREGRAVNI HMFCGRRPGL  480
LLSTMRTLDN LGLDIQQAVI SCFNGFAMDV FRAEQCKEGQ DVHPDQIKAV LLDSIGFHGM  540
M*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1345363KKKGLPAKNLMAERRRRKK
2357364ERRRRKKL
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.97490.0bud| fruit| leaf
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF4952020.0EF495202.1 Malus x domestica bHLH transcriptional factor (ICE1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001280967.10.0transcription factor ICE1-like
SwissprotQ9LSE21e-138ICE1_ARATH; Transcription factor ICE1
TrEMBLD9ZIN80.0D9ZIN8_MALDO; BHLH domain class transcription factor
STRINGPOPTR_0012s10780.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24143482
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26744.41e-129bHLH family protein