PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000304669
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bHLH
Protein Properties Length: 1366aa    MW: 149943 Da    PI: 7.2313
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000304669genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.14.8e-11641683754
                    HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
            HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                    ++ErrRR+++N+++  Lr+++Pk +      K++ a+iL  A++Y+k+L
  MDP0000304669 641 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 683
                    79*********************66......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.7201.9E-7033283IPR016040NAD(P)-binding domain
SuperFamilySSF517355.67E-6637281IPR016040NAD(P)-binding domain
PRINTSPR000812.0E-294057IPR002347Short-chain dehydrogenase/reductase SDR
PfamPF135614.5E-5445281No hitNo description
PRINTSPR000812.0E-29111122IPR002347Short-chain dehydrogenase/reductase SDR
PRINTSPR000808.9E-6111122IPR002347Short-chain dehydrogenase/reductase SDR
PRINTSPR000812.0E-29161177IPR002347Short-chain dehydrogenase/reductase SDR
PRINTSPR000808.9E-6167175IPR002347Short-chain dehydrogenase/reductase SDR
PRINTSPR000812.0E-29187206IPR002347Short-chain dehydrogenase/reductase SDR
PRINTSPR000808.9E-6187206IPR002347Short-chain dehydrogenase/reductase SDR
PRINTSPR000812.0E-29208225IPR002347Short-chain dehydrogenase/reductase SDR
PRINTSPR000812.0E-29251271IPR002347Short-chain dehydrogenase/reductase SDR
PROSITE profilePS5088815.682634683IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.15E-16637701IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.2E-14640689IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-8640683IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.0E-15641696IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.93E-12641687No hitNo description
CDDcd048731.32E-5753794No hitNo description
SuperFamilySSF536334.58E-568841102IPR001048Aspartate/glutamate/uridylate kinase
TIGRFAMsTIGR006575.3E-819061236IPR001341Aspartate kinase domain
PfamPF006964.1E-369111089IPR001048Aspartate/glutamate/uridylate kinase
Gene3DG3DSA:3.40.1160.104.9E-539111105IPR001048Aspartate/glutamate/uridylate kinase
SuperFamilySSF550217.55E-1611091209No hitNo description
CDDcd049331.67E-4211201199No hitNo description
PROSITE profilePS516719.14711251205IPR002912ACT domain
PROSITE profilePS516717.56412851365IPR002912ACT domain
SuperFamilySSF550212.85E-1312971346No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008652Biological Processcellular amino acid biosynthetic process
GO:0004072Molecular Functionaspartate kinase activity
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 1366 aa     Download sequence    Send to blast
MIRSLTREFK LISCNAFLCK RARPFSTRGA AGHGRLQGKV AIITGSASGL GKATAHEFIR  60
HGAHVIVADS DSELGPQVAX ELGPAAHFVQ CDVAVESQIA EAVETAMARH GKLDIMYNNA  120
GITGPAFPPS IVDLNLEEFD RVIRVNVRGA VAGIKHAARV MIPAGSGSIL CTSSIAGLLG  180
GVGPHPYSIS KFTIPGLVKS LASELCRNGI RVNCISPSPI PTSMVVREIW KLYPGAPEDQ  240
VKEIVNGLGE LKGAKCEEID VAQAAVYLAS DEAKYVTGHN LTTFNKNNKK PDKRRKTVML  300
PMSSGAAWMG GDEDDAASWT RNSTTTHNNN XNEAEPRRND QDSSLGASFS NFKSMLEGDW  360
YMNNVLSNPA QDLHAFSSTQ ASETTLAPLQ PIDSSASCSP SPAFSLDPSQ PPQQFLPPKS  420
CFSSLLNVVC SNPFDNSFDL GCDAGFLGSF QGNQPSNSSV LMGFTALNSH AQMGTPELSS  480
SAEFPASRLL PVTDNANVLD GDFGFEGFDG SAGAQLLNRA KLLFPPMGAQ PTLFQKRRQN  540
SVGDGGDKLG NLEISGPRYG GLLESLEKKR KRNEEGEMEE GSLDVSGLNY DSDDFNEYSQ  600
XEVEENAKNG GSNSNANSTV TGVEGGDRKG KKKGLPAKNL MAERRRRKKL NDRLYMLRSV  660
VPKISKMDRA SILGDAIDYL KELLQRINDL HNELESAPPG SLLPASTSFH PLTPTPSTLP  720
CRVKEELCPS SLLSPKTQPK VEVRVREGRT VNIHMFCSRR PGLLLSTMRA LDNLDLDVQQ  780
AVISCFNGFA LDVFRAEYKL SPYVSTRTAP WETETILDST FGPXLLFLNR QPXIFCQRRP  840
PYEISVKFWW TQNLKIFAFQ STTFVTKSWF RNLCRFQQWI LCKCERLFXY EQGFETHLQE  900
LEQLLKGIAM MKELTLRTKD YLVSFGECMS TRLFVAYLNK IGVKARQYDA FEIGFITTDD  960
FTNADILEAT YPAVAKRLHG DWICDPAIPI VTGFLGKGWR SCAVTTLGRG GSDLTATTIG  1020
KALGLREIQV WKDVDGVLTC DPNICQHAQP VPYLTFEEAA ELAYFGAQVL HPQSMRPARE  1080
ADIPVRVKNS YNPNAPGTVI THARDMSKAV LTSIVLKRNV TMLDIVSTRM LGQYGFLAKV  1140
FTTFEDLGIS VDVVATSEVS ISLTLDPSKL WSRELIQQAS ELDHVAEELE KIAVVNLLQH  1200
RSIISLIGNV QRSSLILEXA FQVLRTIGVN VQMISQGASK GTAYIRLVSF LFHLLCQRVN  1260
LVHNFRTLWV ALVIHRKHAF QVLRTIGVNV QMISQGASKA FQVLRTIGVN VQMISQGASK  1320
VNISLVVNDD EAEQCVRALH QAFFGNDLFE VECGSENGSV LVSEQH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cdq_A0.08961351117491ASPARTOKINASE
2cdq_B0.08961351117491ASPARTOKINASE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1630648KKKGLPAKNLMAERRRRKK
2642649ERRRRKKL
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.154090.0bud| leaf
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24143482
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26744.41e-121bHLH family protein