PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000300532
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bZIP
Protein Properties Length: 286aa    MW: 32320.4 Da    PI: 7.5978
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000300532genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.25.4e-11112155245
                    XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                    k+ k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  MDP0000300532 112 KDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 155
                    567899*************************9777777666544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.3E-10104160No hitNo description
SMARTSM003384.9E-7111188IPR004827Basic-leucine zipper domain
PfamPF001704.3E-8113156IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415113157IPR004827Basic-leucine zipper domain
CDDcd147081.39E-22115162No hitNo description
SuperFamilySSF579592.06E-7115161No hitNo description
PROSITE patternPS000360118133IPR004827Basic-leucine zipper domain
PfamPF141445.0E-32207280IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MVVEVVVANS GGGDGHNSEM VEVVVAMVTE GGVPSCRQRL AITKGSTFLL VLFCIKWWYL  60
EVGIXSAMAD GSPRTDISTD GETDDKNRRF DRDQYAIAPV ASDSSDKSKD PKDQKTLRRL  120
AQNREAARKS RLRKKAYVQQ LESSRLKLTQ LEQELQRARQ QADDPARVQT LTWLLEHERL  180
DIYAGSKEGA MAFDVEYGRW QEEHNRQINE LRSAVNSHAS DTELRIIVDG VLAHYDEVFR  240
LKGTAAKADV FHLLSGMWKT PAERCFLWLG GFRSSELLKV KLFLIS
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.156274e-48bud| leaf| stem
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Expressed primarily in roots of young seedlings and later expressed in aging cotyledons, mesophyll cells of hydathodes on leaf margins, vascular tissue and trichomes of senescing rosette leaves. Also detected in young lateral roots and in mature pollen grains.
UniprotTISSUE SPECIFICITY: Expressed predominantly in roots and flowers.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFJ5981380.0FJ598138.1 Malus hupehensis TGA1a-related protein 6 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028951580.11e-129transcription factor TGA6-like
RefseqXP_028951584.11e-129transcription factor TGA6-like
SwissprotQ391404e-95TGA6_ARATH; Transcription factor TGA6
TrEMBLA0A498KCW91e-155A0A498KCW9_MALDO; Uncharacterized protein (Fragment)
STRINGXP_008344569.11e-134(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06960.21e-80OCS-element binding factor 5