PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000269374
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family TCP
Protein Properties Length: 614aa    MW: 66345 Da    PI: 6.8597
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000269374genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1211.3e-375035955103
            TCP   5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaakskk 99 
                    ++ h+++hTkv gR+RR+R+sa+caar+F+L++eLG+++d++tieWL+qqak+ai++ tgt++++a+++  + s +ss+s+ s++       +sk 
  MDP0000269374 503 QTIHKDRHTKVKGRGRRIRMSATCAARVFQLTRELGHKSDGETIEWLFQQAKHAIIATTGTGTIPANFStLNISLRSSGSTFSAP-------PSKT 591
                    567***************************************************************9997777777777633333.......3333 PP

            TCP 100 sqks 103
                    +++s
  MDP0000269374 592 APHS 595
                    3333 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036343.9E-36506590IPR005333Transcription factor, TCP
PROSITE profilePS5136925.956506560IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 614 aa     Download sequence    Send to blast
MYECLGPAAI KGSSHKPNQI IAAEALKWAT ECTSSHQDFS FLPWIPPPKH STIIIPISSL  60
PLQPTNSQKP RPSPNDSLSL HNSRNFPDED EDEKSYLRSE HSNRLLQAPN LSHSYSRTHK  120
LRTGSSTSSE FFYLGTLVNS RSLEERVDSG GSVGRSAKLE TRKVDSPDLQ PLXXLSRQIS  180
RLSRCKNAEL GSTQDRDDEE EEEEEEFYSP RGSSGDRESS NENXSGSRRI LAAVXGGVFD  240
RRSSETTSCS CSSXELGSPP RSHSISLSPP XTLSPNRRPE EPKLPEPSAT RYTTPFGDVN  300
VRSPSXTPLS SPERAADEYP SASDRNGXSP SMSSLSSSPE KGLEKTPDAP LKVSVVSDQS  360
SPISSPERGF XNNPHASSKV SVVTDQSSLI SSPERHFXIX PDALSKVSVV SGQSSPISSP  420
ELXFGNNTDG LTKVTAFXDR NDQSPSPLSH CSSSXERESD GSDSKAXSFS PSSFGSSAAT  480
AFASFPANFS SFSTSSTSDP SGQTIHKDRH TKVKGRGRRI RMSATCAARV FQLTRELGHK  540
SDGETIEWLF QQAKHAIIAT TGTGTIPANF STLNISLRSS GSTFSAPPSK TAPHSFPGAL  600
ALAHHPHYDE GFAH
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.286570.0leaf
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008350770.10.0PREDICTED: formin-like protein 1
TrEMBLM5W8338e-86M5W833_PRUPE; Formin-like protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF60773050
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58100.12e-39TCP family protein