PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000248470
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family AP2
Protein Properties Length: 106aa    MW: 11429.6 Da    PI: 10.7224
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000248470genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP222.72.5e-0771101127
            AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng...k 27 
                    s y+GV++++++gr++A+++d  ++n    k
  MDP0000248470  71 SIYRGVTRHRWTGRYEAHLWDkSTWNHnqnK 101
                    57*******************6666433332 PP

Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    Send to blast
MASSSSDPGP KTESGSGGGS GGGGVEASEA VIASDQLMVY RGVKKSKKER GCTAKERISK  60
MPPCAAGKRS SIYRGVTRHR WTGRYEAHLW DKSTWNHNQN KKGKQX
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008392327.18e-72PREDICTED: AP2-like ethylene-responsive transcription factor At2g41710
RefseqXP_009363210.12e-68PREDICTED: AP2-like ethylene-responsive transcription factor At2g41710 isoform X1
RefseqXP_009363211.12e-68PREDICTED: AP2-like ethylene-responsive transcription factor At2g41710 isoform X2
SwissprotQ8GWK24e-47AP2L4_ARATH; AP2-like ethylene-responsive transcription factor At2g41710
TrEMBLA0A0A0LCL82e-53A0A0A0LCL8_CUCSA; Uncharacterized protein
STRINGfgenesh2_kg.4__2311__AT2G41710.21e-50(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF60072936
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41710.14e-48AP2 family protein