PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000247912
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bHLH
Protein Properties Length: 1134aa    MW: 122866 Da    PI: 5.9366
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000247912genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.43.9e-11619661754
                    HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
            HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                    ++ErrRR+++N+++  Lr+++Pk +      K++ a+iL  A++Y+k+L
  MDP0000247912 619 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 661
                    79*********************66......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.7203.6E-7611280IPR016040NAD(P)-binding domain
SuperFamilySSF517358.0E-7215265IPR016040NAD(P)-binding domain
PRINTSPR000811.9E-311835IPR002347Short-chain dehydrogenase/reductase SDR
PfamPF135612.3E-6023264No hitNo description
PRINTSPR000811.9E-3189100IPR002347Short-chain dehydrogenase/reductase SDR
PRINTSPR000805.3E-689100IPR002347Short-chain dehydrogenase/reductase SDR
PRINTSPR000811.9E-31139155IPR002347Short-chain dehydrogenase/reductase SDR
PRINTSPR000805.3E-6145153IPR002347Short-chain dehydrogenase/reductase SDR
PRINTSPR000811.9E-31165184IPR002347Short-chain dehydrogenase/reductase SDR
PRINTSPR000805.3E-6165184IPR002347Short-chain dehydrogenase/reductase SDR
PRINTSPR000811.9E-31186203IPR002347Short-chain dehydrogenase/reductase SDR
PRINTSPR000811.9E-31229249IPR002347Short-chain dehydrogenase/reductase SDR
PROSITE profilePS5088815.682612661IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.97E-16615680IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.2E-14618667IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.1E-9618661IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.52E-12619665No hitNo description
Gene3DG3DSA:4.10.280.103.5E-15619674IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048738.70E-7731772No hitNo description
Gene3DG3DSA:3.40.1160.101.6E-32879926IPR001048Aspartate/glutamate/uridylate kinase
PfamPF006961.4E-218791132IPR001048Aspartate/glutamate/uridylate kinase
PROSITE patternPS003240881889IPR018042Aspartate kinase, conserved site
SuperFamilySSF536336.84E-368811132IPR001048Aspartate/glutamate/uridylate kinase
Gene3DG3DSA:3.40.1160.101.6E-3210011134IPR001048Aspartate/glutamate/uridylate kinase
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008652Biological Processcellular amino acid biosynthetic process
GO:0004072Molecular Functionaspartate kinase activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 1134 aa     Download sequence    Send to blast
MPFSTFGASG HGRLEGKVAI ITGSASGLGK ATAHEFIRHG AHVIIADSDS ELGPQVAKEL  60
GPAAYFVQCD VTIESQIAEA VETAMARHGK LDIMYNNAGI TGPAFPPSIA DLNLEEFDRV  120
IRVNLRGAVA GIKHAARVMK PAGSGSILCT SSIAGLLGGL GPHSYSISKF TIPGLVKSLA  180
SELCRNGIRV NCISPGPIPT PMAVREIKQF YPGATEEQVK EIVNGLGELK GAKCEEIDVA  240
QAAVYLASDE AKYVTGHNLV LDGGTFFEFT PQRHIFREEE SEAIDITNNG AACMGGDEHX  300
AASWTRNNNN NEAEPRRNDQ DSSLGVSFSN VKLMLEGDWY TNNILSNPAQ DLHTFSSTQA  360
SETTFAPLQP NDSSASCSXS QAFSIDSSQP SQQFLPPKSC FSSLLNVVCS NPLDSSFDLG  420
CDAGFLGSFQ GNQPSKSSLL MGFTALNSHS QMGTPEFSSS AEFPASRLLP VTDNANILDG  480
DFGFEGFDGS AGAQLLNGAK LLFPPMGAQP TLFQKRRQNS GGDGADKLGN LEISAPRYGG  540
LVENLEKKRX NXEGEVEEES LDVSGLNYDS NDFNEHSQVE VEDNAKNGGN NSNANCTVTG  600
VEGGDRKGKK KGLPAKNLMA ERRRRKKLND RLYMLRSVVP KISKMDRASI LGDAIDYLKE  660
LLQRINDLHN ELDSAPPSSL LPPSTSFHPL TPPPSTLPCR VKEELCPSSL PSPKTQPKVE  720
VRVREGRTVN IHMFCARRPG LFLSTMRALD NLDLDIQQAV ISCFNGFALD VFRAELCTPF  780
TSFVEITSFR METALHFSRV KTLCPASPER SLRFKQPLWS QSLRFATGVA SSNGFFASAK  840
SFSCTSRVLR VSCEGGIADV LEKKQTDNQS LGDNEKQLTC VMKFGGSSVA TAERMREVAD  900
LILSFPQERP VIVLSAMGKT TNKLLLAGEK AVTCGVTNVS MIDELSFIKE LHLRKNNSIF  960
DFLTVHHPIL NRTVEELGVD SSIISSHLEE LEQLLKGIAM MKELTLRTKD YLVSFGECMS  1020
TRLFAAYLNK IGVKARQYDA FEIGFITTDD FTNADILEAT YPAVAKRVQG DWICDPAIPI  1080
VTGFLGKVSL LANFNMYSVF EKGWKSCAVT TLGRGGSDLT ATTLGKALGL REIQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cdq_A1e-120860113410250ASPARTOKINASE
2cdq_B1e-120860113410250ASPARTOKINASE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1608626KKKGLPAKNLMAERRRRKK
2620627ERRRRKKL
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.154091e-162bud| leaf
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24143482
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26744.43e-93bHLH family protein