PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000187703
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family AP2
Protein Properties Length: 648aa    MW: 71121.3 Da    PI: 7.5216
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000187703genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2378.2e-12293349155
            AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                    s+++GV++++++gr++A+++d  ++  g  rk  + g ++ +e+Aa+a++ a++k++g
  MDP0000187703 293 SQFRGVTRHRWTGRYEAHLWDnSCKkEGqTRKGRQ-GGYDMEEKAARAYDLAALKYWG 349
                    789******************77776664346655.77******************98 PP

2AP250.64.9e-16394443355
            AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    y+GV+++++ grW A+I  +     +k  +lg+fgt eeAa+a++ a+ k++g
  MDP0000187703 394 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFGTQEEAAEAYDIAAIKFRG 443
                    9***************988532...5*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.26E-18293357No hitNo description
SuperFamilySSF541711.31E-13293359IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.3E-11294358IPR001471AP2/ERF domain
PfamPF008474.7E-9294349IPR001471AP2/ERF domain
PROSITE profilePS5103216.792294357IPR001471AP2/ERF domain
SMARTSM003806.6E-20294363IPR001471AP2/ERF domain
PRINTSPR003677.6E-6295306IPR001471AP2/ERF domain
SuperFamilySSF541711.83E-17392452IPR016177DNA-binding domain
CDDcd000189.38E-25392453No hitNo description
Gene3DG3DSA:3.30.730.103.8E-18393451IPR001471AP2/ERF domain
PROSITE profilePS5103218.979393451IPR001471AP2/ERF domain
SMARTSM003801.1E-32393457IPR001471AP2/ERF domain
PfamPF008478.8E-11394443IPR001471AP2/ERF domain
PRINTSPR003677.6E-6433453IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 648 aa     Download sequence    Send to blast
MKSMNDHNNN NGSSNSNNNN WFGFSLLPHM KMEDASSSSC SAALPSGNSS FYNLSSSGVC  60
CYGVGDNGNF HYSPLSVMPL KSDGSLCIME ALSRSQTEGI MPNTSPKLED FLGGAAHDYV  120
SEEREAMALS LDSYYNAAAE QQQQNHHIPV HSNSYYSGIP IQGIYHTQLE EEHSKNTQMT  180
QMPEDLKTCW VSRQYSAHPA LEHHHMNNVT MVVENGGSGS VNGGMNRGDL QSLTLSMSPG  240
SQTSCVTAPK QISPTQTECA VAAIETKKRG CGKLGQKQPV HRKSIDTFGQ RTSQFRGVTR  300
HRWTGRYEAH LWDNSCKKEG QTRKGRQGGY DMEEKAARAY DLAALKYWGS ATHINFPLDN  360
YTAQLEEMKN MSRQEYVAHL RRKSSGFSRG ASMYRGVTRH HQHGRWQARI GRVAGNKDLY  420
LGTFGTQEEA AEAYDIAAIK FRGANAVTNF DITKYDVEKI MSSNTLLAGE FARRTKVIEP  480
NILAIEHNPP TQNIVEATQT EINXGNSLDW KMALYQSAAQ QQANSCAQTV DQKSIGSGSY  540
RXPSFSXALE DYIGVESVHS SQTLMDESAR VGAHFSNPSS LVTSLGSSRE GSPDKSGSNM  600
LFAKPPLASK FISPTAAAAV SSWFPSAQLR PSAVSMSQLP LFAAWNET
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008393692.10.0PREDICTED: AP2-like ethylene-responsive transcription factor ANT
SwissprotQ389141e-158ANT_ARATH; AP2-like ethylene-responsive transcription factor ANT
TrEMBLM5XJF30.0M5XJF3_PRUPE; Uncharacterized protein
STRINGVIT_18s0001g08610.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF91634114
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.11e-149AP2 family protein