PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000182455
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family AP2
Protein Properties Length: 204aa    MW: 21805.2 Da    PI: 4.9524
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000182455genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP221.65.5e-07182202121
            AP2   1 sgykGVrwdkkrgrWvAeIrd 21 
                    s+y+GV++++++grW+++I+ 
  MDP0000182455 182 SQYRGVTFYRRTGRWESHIWS 202
                    78*****************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MWDLNDSPDQ RPRGEESEGC SSQKTSADGD EEKGKRVGSV SSSSSSAVVI EEDGSDEEED  60
QDDGPTKLAK KQGGGGGGGX KIFGFSVTHE ESMDSDPPVT VTRQFFPVEQ DSSSNFDVMG  120
SATGGGSIPP PPSTSSSFPR AHWVGVNFGQ SDSGSPGKPP PTAEASHQPM KKSRRGPRSR  180
SSQYRGVTFY RRTGRWESHI WSVN
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.29680.0fruit| leaf| stem
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM5065840.0KM506584.1 Eriobotrya japonica transcription factor AP2-1 (AP2-1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008338335.11e-144PREDICTED: floral homeotic protein APETALA 2-like
SwissprotP479275e-27AP2_ARATH; Floral homeotic protein APETALA 2
TrEMBLQ8VWW81e-100Q8VWW8_MALDO; Transcription factor AHAP2
STRINGVIT_07s0031g00220.t017e-46(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37843463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.22e-17AP2 family protein