PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000174930
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family bZIP
Protein Properties Length: 306aa    MW: 34774.1 Da    PI: 8.4757
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000174930genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.51.7e-095983428
                   XCHHHCHHHHHHHHHHHHHHHHHHH CS
         bZIP_1  4 lkrerrkqkNReAArrsRqRKkaei 28
                   l+  rr+++NReAAr+sR+RKk +i
  MDP0000174930 59 LQTLRRLAQNREAARKSRLRKKIYI 83
                   6778******************887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF001701.8E-66083IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.84E-56284No hitNo description
PROSITE patternPS0003606378IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.6E-56389No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MADGSPRTDI STDGETDDKN RRFDRDQYAI APVASDSSDK SKDPKDQKCQ DAHLFDCILQ  60
TLRRLAQNRE AARKSRLRKK IYILXCLGNX RIDNELHTRV RSNTINLSAT PCPSFVDNKS  120
QLTVXIWXGN SKPNVCPAFP ANKIXAYVQQ LESSRLKLTQ LEQELQRARQ QGIFISNSGD  180
AAHSNSGNVH GPGDSDLVVS DKVVFNILMG AFLVLIFXLN WYNQPDPSLK PFKLIWKADD  240
PAKVQTLAWL LEHERLDIYA GSKEGPMHTD RHTYWIVLYE CKGRMLTTFM FTFFLLGISG  300
ITCWNH
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFJ5981382e-71FJ598138.1 Malus hupehensis TGA1a-related protein 6 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025624822.12e-39transcription factor TGA2.2 isoform X1
RefseqXP_029145693.12e-39transcription factor TGA2.2 isoform X1
RefseqXP_029145694.12e-39transcription factor TGA2.2 isoform X1
RefseqXP_029145695.12e-39transcription factor TGA2.2 isoform X1
SwissprotQ415582e-16HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A445B1B21e-38A0A445B1B2_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06960.21e-12OCS-element binding factor 5