PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000166059
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family AP2
Protein Properties Length: 368aa    MW: 41455.9 Da    PI: 7.2182
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000166059genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.42.7e-1153109155
            AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                    s y+GV++++++gr++A+++d  ++n  ++k+ + g ++ +e A +a++ a++k++g
  MDP0000166059  53 SVYRGVTRHRWTGRFEAHLWDkNCWNEsQNKKGRQGAYDDEEAAGRAYDLAALKYWG 109
                    78*******************99998898888888*****99*************98 PP

2AP252.81e-16152203155
            AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    s+y+GV +++++grW+A+I  ++    +k+ +lg++ t eeAa a++ a+ +++g
  MDP0000166059 152 SKYRGVARHHQNGRWEARIGRVYG---NKYLYLGTYATQEEAAIAYDMAAIEYRG 203
                    89*****************99654...4*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.27E-1653119No hitNo description
SuperFamilySSF541711.44E-1453119IPR016177DNA-binding domain
PfamPF008471.1E-753109IPR001471AP2/ERF domain
PROSITE profilePS5103218.76954117IPR001471AP2/ERF domain
SMARTSM003801.4E-1854123IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.8E-1254118IPR001471AP2/ERF domain
PRINTSPR003674.3E-65566IPR001471AP2/ERF domain
CDDcd000181.99E-23152213No hitNo description
PfamPF008472.5E-11152203IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-18152213IPR016177DNA-binding domain
SMARTSM003801.0E-25153217IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-17153212IPR001471AP2/ERF domain
PROSITE profilePS5103218.321153211IPR001471AP2/ERF domain
PRINTSPR003674.3E-6193213IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009737Biological Processresponse to abscisic acid
GO:0010187Biological Processnegative regulation of seed germination
GO:0040008Biological Processregulation of growth
GO:0045723Biological Processpositive regulation of fatty acid biosynthetic process
GO:1901959Biological Processpositive regulation of cutin biosynthetic process
GO:0000981Molecular FunctionRNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MAKTSQKKQN STAGSTNXST TTTTTTSSTA TTTTKGKRTQ KSVRRDSPPQ RSSVYRGVTR  60
HRWTGRFEAH LWDKNCWNES QNKKGRQGAY DDEEAAGRAY DLAALKYWGR DTILNFPLST  120
YQEELIELES QSKEEYIGSL RRKSSGFSRG VSKYRGVARH HQNGRWEARI GRVYGNKYLY  180
LGTYATQEEA AIAYDMAAIE YRGLNAVTNF DLSRYIKSXC PDNTNXPNDA QQNPNGDLHQ  240
MQNPNGVLNQ MHNPDYKPEL EIMPDHTSSS SASESTVVLP RSENGSSASS ALGLLLQSPK  300
FKEMLERSSV TECSPTLSEP EIRRRIFPDD IQTYFDCQDL NSFAEGDDII FGDLRSFTSP  360
VFHCELDA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008381132.10.0PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060 isoform X2
SwissprotQ94AN41e-115AP2L1_ARATH; AP2-like ethylene-responsive transcription factor At1g16060
TrEMBLM5X5J70.0M5X5J7_PRUPE; Uncharacterized protein
STRINGPOPTR_0003s18350.11e-158(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF130034101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16060.11e-110ARIA-interacting double AP2 domain protein