PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr9P08900_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 248aa    MW: 26581.2 Da    PI: 8.4353
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr9P08900_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.15e-15165225262
                            XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                            + l+r++r++kNRe+A rsR+RK+a++ eLe  v  Le eN +L  e ee  k+  k  +e
  GSMUA_Achr9P08900_001 165 ATLQRQKRMIKNRESAARSRERKQAYTVELESLVRRLEVENASLLREQEEHYKMRLKQLME 225
                            579*****************************************99999888887766655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.2E-13160225No hitNo description
SMARTSM003383.7E-10164225IPR004827Basic-leucine zipper domain
PfamPF001706.1E-14165225IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.312166214IPR004827Basic-leucine zipper domain
CDDcd147071.55E-19168218No hitNo description
SuperFamilySSF579591.53E-10168217No hitNo description
PROSITE patternPS000360171186IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MASSRVMPSS SSAANSDLAR QPPSMYPLAA AADPPPSSAS GDDPAGNLGS TAMDDLLRSF  60
YCEAEAPPPL PAREAAAGGK MAEQVLKEVA AAGRSVAGVD GSAAAGYGEM TLEDFLARAG  120
AQEQLLMVEN PILGFGNGVE GGGSGGVGGG GRGWKRPMVD SVDKATLQRQ KRMIKNRESA  180
ARSRERKQAY TVELESLVRR LEVENASLLR EQEEHYKMRL KQLMENLIPV TEMKKPPRIL  240
RRTHSMQW
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the ABA-responsive elements (ABREs) in vitro. Involved in abiotic stress responses and abscisic acid (ABA) signaling (PubMed:20039193). Involved in the signaling pathway that induces growth inhibition in response to D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by anoxia, drought, salt stress, oxidative stress, cold and abscisic acid (ABA) (PubMed:20039193). Induced by D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009416888.11e-135PREDICTED: G-box-binding factor 4-like
SwissprotQ0JHF12e-45BZP12_ORYSJ; bZIP transcription factor 12
TrEMBLM0TYP91e-178M0TYP9_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr9P08900_0011e-179(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26653786
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03970.15e-25G-box binding factor 4
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]