PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr8P09270_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family CAMTA
Protein Properties Length: 1131aa    MW: 128819 Da    PI: 7.9794
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr8P09270_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1154.91.7e-48291373110
                   CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahse 89 
                            +e ++rwlk+ e++ iL+n++ +e+t++++++p+sgsl+L+nr+++ryfr+DG+sw+kk +gktvrE he+LKvg+ e+l+cyYah+e
  GSMUA_Achr8P09270_001  29 QEaQTRWLKPVEVLYILQNYKCFEITQKPPQKPPSGSLFLFNRRVLRYFRNDGHSWRKKTNGKTVREGHERLKVGNSEALNCYYAHGE 116
                            6669************************************************************************************ PP

                   CG-1  90 enptfqrrcywlLeeelekiv 110
                            +n++fqrr+yw+L+ e+++  
  GSMUA_Achr8P09270_001 117 QNSNFQRRSYWILDPEYRHLS 137
                            ****************99875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143768.74824150IPR005559CG-1 DNA-binding domain
SMARTSM010766.0E-6527273IPR005559CG-1 DNA-binding domain
PfamPF038593.9E-4330134IPR005559CG-1 DNA-binding domain
PfamPF018331.6E-6586657IPR002909IPT domain
Gene3DG3DSA:2.60.40.102.8E-4586670IPR013783Immunoglobulin-like fold
SuperFamilySSF812968.71E-15587668IPR014756Immunoglobulin E-set
Gene3DG3DSA:1.25.40.208.4E-17782878IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484036.68E-16783879IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029716.759784876IPR020683Ankyrin repeat-containing domain
CDDcd002043.03E-10789876No hitNo description
PfamPF127963.2E-7811878IPR020683Ankyrin repeat-containing domain
SMARTSM002488.9E-4817846IPR002110Ankyrin repeat
PROSITE profilePS5008811.568817849IPR002110Ankyrin repeat
SMARTSM002482200856885IPR002110Ankyrin repeat
SMARTSM000156.8937959IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500966.76938964IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525405.04E-79401044IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.0439941016IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500966.6689971024IPR000048IQ motif, EF-hand binding site
PfamPF006120.00279971015IPR000048IQ motif, EF-hand binding site
SMARTSM000155.9E-410171039IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.88910181046IPR000048IQ motif, EF-hand binding site
PfamPF006121.1E-410201039IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1131 aa     Download sequence    Send to blast
MNIMNISYKI KLLSLPCAVT GFDINKLSQE AQTRWLKPVE VLYILQNYKC FEITQKPPQK  60
PPSGSLFLFN RRVLRYFRND GHSWRKKTNG KTVREGHERL KVGNSEALNC YYAHGEQNSN  120
FQRRSYWILD PEYRHLSNID MTNNLKQPQS MSFIFVHQTR KPCCKYHSLP YRIVQPGMGG  180
TYRSDRLTVR GLLATGPHCA MYCSAVAVQY TVALQQYSTV AVHCYRCSTV HQYTVAVLHR  240
SVHRTILVPS PGRNTGTVRA YEHIVLVHYR EVVELRYNHA SAHFLEPNFF HTLCKHSSYN  300
LSKLKVECSY FCYLNYQCSY ASTMLLKNNV YFATPGDLIM VHSCVFQGRY TPRKILSISN  360
ESSPTLRYST SVSNDLAQCF PSCTGELNEP CQNSCSPVSV EEVSSKFERR NIETSHLNRM  420
DRSESCNQLL LPELNQALRK LKEQLSLDDD EEDNFVSPKK ELLPHGNLNV ETHDLQHLNY  480
EIKNSLDETL QNPLDEFKQM SDGHFDEDGM QYDDMLNNSG MCCCLIYCMR LEKYLFVKVE  540
FIFLVLDEFN KGKQLYTKMF IKNQFEAPLE IDASLTSPQG YLFTMREVAP EWAFSSENTK  600
VIITGNFLCS PSECEWTALF GDTEVPLEIV QDGVFRCLAP QHISGKVKLC VTSGNGKPCS  660
EVHEFEFREK LQNTSSSSTL SRVDALKTSE ELMLLVNLVQ ILLSGHSTSV TQEDELEPEV  720
NPLWKLKGSS NQLELIIGSI LTGSEPPGKL IELILQELLK DKLQQWLSSK HQGEPDDGCL  780
LSKQDQCIIH MISGLGYQWA LHPILDSGMC INYRDSNGWT ALHWAARFGR EEMVASLLAA  840
GASAGAVTDP SSQDPAGQTP ASLAVANGHR GLAGYLSEAA LTNHLFSLTT EKTEILEGSS  900
SVKAERGVDN ISERRAHLQG GTENQLSLKD SLEAVRNATQ AAARIQAAFR AFSFRKKQQA  960
DIVRGIYDMS QTHIYGFSVA SRMHKTILGF RDHKFVKAAV SIQKHYRCWK KRKEFLQLRS  1020
NVVKIQSHFR VHLARKKYKE FLRSVGVLEK IMLRWYRRGV GLRGFRAEPK PIVEEEEDDI  1080
IKVFRQQKVD KALDEALSRV ISVVESPEAR EQYRRMLESY QQAQAELSQC G
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009411793.10.0PREDICTED: calmodulin-binding transcription activator 4-like
RefseqXP_009411794.10.0PREDICTED: calmodulin-binding transcription activator 4-like
RefseqXP_009411795.10.0PREDICTED: calmodulin-binding transcription activator 4-like
SwissprotQ9FYG21e-162CMTA4_ARATH; Calmodulin-binding transcription activator 4
TrEMBLM0TNY00.0M0TNY0_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr8P09270_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62383241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.11e-125Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains