PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr6P06240_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family GeBP
Protein Properties Length: 300aa    MW: 34264.9 Da    PI: 10.0234
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr6P06240_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57337.75.7e-1240110879
                 DUF573   8 seeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkeps 79 
                            s  D  ++L+G i+f+++tg  p++ ++  fyefvk+ +s   s  q+++++r++++K+++  ++  +g++ +
  GSMUA_Achr6P06240_001  40 SAADYAAILRGAIEFRDQTGLAPTKsNLAPFYEFVKGYLSDILSPGQVFNRLRHIRHKYNHSAAD--TGDDLV 110
                            5679999**************99988**********************************99988..666655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.1E-741104IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MLSDPSAAAA KGQRKRKAGE HPGDGEKGSN SGRKRSNESS AADYAAILRG AIEFRDQTGL  60
APTKSNLAPF YEFVKGYLSD ILSPGQVFNR LRHIRHKYNH SAADTGDDLV LKLAAKLWPE  120
EEVKKDNKEG KNPKKEKKHN SIALEEDKNA EKGKKEEKNP RKAENEKKEE KSPKTHNLRK  180
KGTDSKLKKK QILVAPEEED EEMGNKIRGE EMKNKNGEEW GIEPESFPYL THHVAEHWKT  240
NGLPKASLEV GMKLINKSKA RALEDKWKRH LEDEMKFEMN WAKTCRELFA MLLEMHKTMR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLM0T4M20.0M0T4M2_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr6P06240_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26822763