PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr3P07330_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family NAC
Protein Properties Length: 416aa    MW: 46481.7 Da    PI: 5.1355
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr3P07330_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM105.66.2e-33581971128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk. 79 
                            lp+G++F+P+d+el+  +L +kv + +      ++++   ++e  +i++++P++Lp  vk++ +  +fF+++ k+y+ g+rk+r+++ 
  GSMUA_Achr3P07330_001  58 LPKGVKFDPSDQELI-SHLMAKVGTGDakphpfINEFILtVEEEdGICYTHPKKLP-GVKQDGSVSHFFHRTFKAYNIGTRKRRKINt 143
                            799************.677778777665776664443443666647**********.677888899******************7554 PP

                    NAM  80 ....sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                                + +W++tgk+k+v++ +g++ g+kk++v+y  + + +k+ekt+Wvmh+y+l
  GSMUA_Achr3P07330_001 144 ddlvDVRWHKTGKTKPVIV-DGRHLGCKKIMVLYmsTTKGEKPEKTNWVMHQYHL 197
                            5666899************.999***********7645777788*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-3743216IPR003441NAC domain
PROSITE profilePS5100531.46158216IPR003441NAC domain
PfamPF023658.3E-1559197IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000077Biological ProcessDNA damage checkpoint
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010332Biological Processresponse to gamma radiation
GO:0040020Biological Processregulation of meiotic nuclear division
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
MSSPSWLIDS KRIATKIKNA SATVDPSKVK WISNPTKACP RCNHVIDNSD VVQEWPGLPK  60
GVKFDPSDQE LISHLMAKVG TGDAKPHPFI NEFILTVEEE DGICYTHPKK LPGVKQDGSV  120
SHFFHRTFKA YNIGTRKRRK INTDDLVDVR WHKTGKTKPV IVDGRHLGCK KIMVLYMSTT  180
KGEKPEKTNW VMHQYHLGTG EDEKDGEYVV SKIFYQQQSK PGDKNGQDLG DKNGQNLTME  240
IDHNVVTELD PAPGAVPGSP EQNSSDKQDH VERLEVISGQ SNVHHSGDEE HHVHLEGDKP  300
DDQGEHPTED TKWWEGESQY LLDSQQLAEG IAICEEFLQS QSSCAGEEVK KSNLCLSDYA  360
AMGAEALKMD LEECQNLDST DHANIELDTP PDFRLSQLEF GSQDSFLAWP GSKLAD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009391397.10.0PREDICTED: NAC domain-containing protein 8 isoform X1
SwissprotQ6NQK21e-143NAC8_ARATH; NAC domain-containing protein 8
TrEMBLM0SCK00.0M0SCK0_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr3P07330_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP67853651
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-144NAC family protein