PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr1P05050_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 426aa    MW: 45587.4 Da    PI: 7.7878
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr1P05050_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_164.52e-20285347163
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                            e++lkrerrkq+NRe+ArrsR+RK+ae eeL++kv++L+aeN++L++++++ ++ +++l+ e+
  GSMUA_Achr1P05050_001 285 ERSLKRERRKQSNRESARRSRLRKQAENEELAKKVEALSAENRTLISKISQVTESSETLRLEN 347
                            79*******************************************************999876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.4E-29191IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165964.2E-7128245No hitNo description
Gene3DG3DSA:1.20.5.1701.6E-14282344No hitNo description
SMARTSM003381.0E-18285349IPR004827Basic-leucine zipper domain
PfamPF001701.4E-18285347IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.484287350IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.63E-10288343No hitNo description
CDDcd147024.36E-20290338No hitNo description
PROSITE patternPS000360292307IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MGNNEATTPS KSEKPYSPVQ EQPAVHPYPD WAAMQAYYGP GVMPPPYFGT SVVPGHAPHP  60
YMWAPQPFIP HFGSPYAGMY PHGVYPHSSL PPGTHGHYPG LAPSSAATKA MATPLSIEMP  120
DKASGSRDKG VMTKLKRFDG LTVSVDSRST NNAAGAYGNE LSQSGYNSAA GSSNGSDGSN  180
SAGGSKDQRK RSSEDIQSSD DRKVESNSDP AQGGERSSSS KLSSGVTVAH AKIAGNPVIN  240
VPSPCQAQMM SVKTIDTPGR PPTIALVPGC NSQHLLSNNS LLYDERSLKR ERRKQSNRES  300
ARRSRLRKQA ENEELAKKVE ALSAENRTLI SKISQVTESS ETLRLENAAL LEKLNARSVH  360
AEESSPDKME TDSAPSVVVE NFLSMIDKQS SSSLSEKQDD EKSDKSNGKL RQLMDTSPTT  420
DAVAAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1301307RRSRLRK
2301308RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009385784.10.0PREDICTED: G-box-binding factor 3-like isoform X2
TrEMBLM0RX630.0M0RX63_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr1P05050_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.12e-66G-box binding factor 3