PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10032724
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family NAC
Protein Properties Length: 382aa    MW: 42363.5 Da    PI: 4.9502
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10032724genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM47.94.5e-15141187128
          NAM   7 FhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkk 104
                  F+ t ee+  + L k ++g++l+  +v++++  + + P++Lp+      + wy F k+++        n  t +g+Wk +g++ e+++ ++  +g + 
  Lus10032724  14 FDGTPEEIF-KSLLKMMRGSTLPS-NVVDDICPFMYAPSNLPA------DIWYLFRKSAE--------NNDTGKGFWKLKGESLELFT-DSVITGWRS 94 
                  777888988.55777899999999.89****99********92......469*9988766........446899**************.999****** PP

          NAM 105 tLvfykgrapkgektdWvmheyrl 128
                  tL +y+g++p+ +ktdW+m++y +
  Lus10032724  95 TLEYYEGKEPEVVKTDWLMQQYWV 118
                  **********************76 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.4678141IPR003441NAC domain
SuperFamilySSF1019413.01E-2113141IPR003441NAC domain
PfamPF023652.8E-813116IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MCPPAQNHIA DIGFDGTPEE IFKSLLKMMR GSTLPSNVVD DICPFMYAPS NLPADIWYLF  60
RKSAENNDTG KGFWKLKGES LELFTDSVIT GWRSTLEYYE GKEPEVVKTD WLMQQYWVTE  120
KDLVESSKEK ESNSLCRVFL ERDHVDVKRE CVATPLVLDE AESQRRLITS SVCSSGSTSK  180
AEGDRIAVAD VWANLLDECF AGGHYLEMLD LAVPASSSSG TDNSSCMSIS SDEYFDTWAL  240
LREIESDSIQ DSVQKTGECK LNISTTCKPE ELTMSPRSSV SIVSTRETEL ASEQVAGTGP  300
SLSDMSEQHK DINDKAKQKQ KQQQVSRKHK LADKDKGSSS DSSHGGSSSG ASRDVKKEGS  360
KGTMKKRKNK YLCFMAFNFI F*
Cis-element ? help Back to Top
SourceLink
PlantRegMapLus10032724
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGLus100327240.0(Linum usitatissimum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF105882235
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.14e-13NAC domain containing protein 57