PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR11G02850.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family bZIP
Protein Properties Length: 484aa    MW: 53083.4 Da    PI: 6.8283
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR11G02850.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.88.2e-12180208533
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee 33 
                      k  rr+++NReAAr+sR+RKka+i++Le 
  LPERR11G02850.1 180 KTMRRLAQNREAARKSRLRKKAYIQQLES 208
                      6679***********************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.8E-4175250IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.887178222IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.7E-7178216No hitNo description
SuperFamilySSF579594.38E-7180213No hitNo description
PfamPF001706.7E-9180209IPR004827Basic-leucine zipper domain
CDDcd147083.29E-20180231No hitNo description
PROSITE patternPS000360183198IPR004827Basic-leucine zipper domain
PfamPF141441.0E-28259333IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    Send to blast
MGEASSSSGH SRQSPHVLGY GFHGTMPNSM PSANFFEQGG ATYFGELEEA LMQQVATLRR  60
TQQTATTTST LHHGDTTPFS TAATATVTTA RPPPTLDIFP SWPMRSLHTP KEGSNLTADT  120
TDSESSSKNN SNQNDSSDQQ GLVGEMAGQF DHIPQQQQHK KMATDSPTHS SKTGKALDPK  180
TMRRLAQNRE AARKSRLRKK AYIQQLESSK LKLAQMEQDI HRARSQGLLL GAPGGNTSSA  240
AARFDVDYAR WLEEDGRRMA ELHGGLHAHL PDSDLRAIVD DTLTHYNQLF LLKGMAAKAD  300
VFHLITGMWA TPAERCFLWM GGFRPSELIK TLIPQLDPLT EHQVVGICSL QQSSQQAEEA  360
LSQGLDQLHQ SLAETVAGGS PMDDANVGSF MGHMAIALGQ LSNLEGFVIQ ADNLRQQTIH  420
QMHRILTVRQ AARCFLAIGE YHNRLRALSS FWASRPREIL VADETNCGEL SIAAHPSESQ  480
YSAF
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR11G02850.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0694110.0AK069411.1 Oryza sativa Japonica Group cDNA clone:J023013G15, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006662738.20.0PREDICTED: transcription factor HBP-1b(c38)-like
RefseqXP_015698112.10.0PREDICTED: transcription factor HBP-1b(c38)-like
SwissprotQ53Q700.0TGAL4_ORYSJ; Transcription factor TGAL4
TrEMBLA0A0D9XP550.0A0A0D9XP55_9ORYZ; Uncharacterized protein
STRINGLPERR11G02850.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44443670
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-134bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]
  3. Miyamoto K, et al.
    Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells.
    J. Plant Physiol., 2015. 173: p. 19-27
    [PMID:25462074]