PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR09G09170.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family bZIP
Protein Properties Length: 376aa    MW: 39940 Da    PI: 6.1582
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR09G09170.2genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.66.2e-09303330532
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLe 32 
                      +r+rr++kNRe+A rsR+RK+aei e +
  LPERR09G09170.2 303 RRQRRMIKNRESAARSRARKQAEIMEMQ 330
                      79**********************9876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.2E-8298331No hitNo description
PfamPF001707.1E-7303330IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.4E-6303334No hitNo description
CDDcd147073.17E-13303328No hitNo description
PROSITE patternPS000360306321IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MLTDRWGGRR REEAMEFKNG GSSSDRRPPA AEGATLARQG SVYSLTFDEF QSALAGGGGV  60
GGGGGSGFGK DFSSMNMDEL LRSIWTAEES QAMASASGSA SGLGMAMGAP PPATSLQRQG  120
SLTLPRTLSA KTVDEVWRNL VRDDPPPVGA DGGGGGSEMP PHRQSTLGEM TLEEFLVRAG  180
VVRENPPAPL PPMPPQMPPQ PVPVAPKTTA FLGNFPGAND AAAASLGFAP IGIGDPVLGN  240
GLMPRAVGLP GGALAMQTAV NQFDSGDKGN SDLSSPTEPM PYSFEGLVRG RRNGGGVEKV  300
VERRQRRMIK NRESAARSRA RKQAEIMEMQ KNEMITIVKN ISDFQNCRRN DKGSVWKEEE  360
GLLAKNIDWS LVMNEW
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters. {ECO:0000269|PubMed:10611387}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR09G09170.2
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By abscisic acid (ABA). {ECO:0000269|PubMed:10611387}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015612550.11e-159bZIP transcription factor TRAB1-like
SwissprotQ6ZDF36e-87TRAB1_ORYSJ; bZIP transcription factor TRAB1
TrEMBLA0A0D9XEG70.0A0A0D9XEG7_9ORYZ; Uncharacterized protein
STRINGLPERR09G09170.10.0(Leersia perrieri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19290.25e-38ABRE binding factor 4
Publications ? help Back to Top
  1. Kagaya Y,Hobo T,Murata M,Ban A,Hattori T
    Abscisic acid-induced transcription is mediated by phosphorylation of an abscisic acid response element binding factor, TRAB1.
    Plant Cell, 2002. 14(12): p. 3177-89
    [PMID:12468735]
  2. Kobayashi Y, et al.
    Abscisic acid-activated SNRK2 protein kinases function in the gene-regulation pathway of ABA signal transduction by phosphorylating ABA response element-binding factors.
    Plant J., 2005. 44(6): p. 939-49
    [PMID:16359387]
  3. Kobayashi F,Maeta E,Terashima A,Takumi S
    Positive role of a wheat HvABI5 ortholog in abiotic stress response of seedlings.
    Physiol Plant, 2008. 134(1): p. 74-86
    [PMID:18433415]