PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR07G21050.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family bZIP
Protein Properties Length: 583aa    MW: 61263.9 Da    PI: 6.1078
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR07G21050.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.15.2e-15125185363
                      XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      e kr  r+ +NRe+A  sRqRKk+++eeLe kvk+++a   +L  +++  + e a+lk ++
  LPERR07G21050.1 125 EAKRRARLVRNRESAHQSRQRKKQYVEELEGKVKAMQATIADLTARISCVTAENAALKHQL 185
                      789****************************************************999875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.0E-13123187IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.438125188IPR004827Basic-leucine zipper domain
PfamPF001702.0E-13125185IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.63E-13127185No hitNo description
Gene3DG3DSA:1.20.5.1701.9E-16127186No hitNo description
CDDcd147045.29E-22128179No hitNo description
PROSITE patternPS000360131145IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 583 aa     Download sequence    Send to blast
MAEPDLLAPT FPNLHFPAAP GDDFPDFPAL GGDDAAAFAF EDFDLDDLDF DFDVDLLSPP  60
SPDAPPLPVT SSSSAAAAGS PEAGTSFTGD GGGSKHEESA ESSIGRNGGD GGSSCKDGGK  120
EGGDEAKRRA RLVRNRESAH QSRQRKKQYV EELEGKVKAM QATIADLTAR ISCVTAENAA  180
LKHQLSGAAG GGVPPVPPMP MYPAVYPLPP PWIHPAYAMR GSQVPLVPIP RLKTQQTAAA  240
AAEPPAKKPR KTKKVAGVSL LGFLFLMMVC GCFVPAVNRM YGGSVDVGEG VVFGGSHHGR  300
ILAVEGPQSS VSNGIDPTVP QNGSETLPAL LYLPRNGKHV KINGNLVIKS IVASEKASSC  360
SSNYGGKSSG NQGKGETSLA IPGYVAPLEA GEIMETKGIR NELIALAPGD GSIYREDDGM  420
LPQWFSEAMS GPMLNSGMCT EVFQFDLSAT TADANGIVPV YSESITNTSQ NITGNLPSGR  480
VQKVKNRRIL YSEAIPLQGS TSNDTDHFKA PPKNQSQSHA SRKPVSSVVV SVLADPRDAG  540
DRDGEGRIPS NSLSRIFVVV LIDSVKYVTY SCVLPFKSHS THL
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in endoplasmic reticulum (ER) stress response. Acts as ER stress sensor and activates the transcription factor BZIP50 and the chaperone BIP1. {ECO:0000269|PubMed:22050533}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR07G21050.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By dithiothreitol- and tunicamycin-induced endoplasmic reticulum (ER) stress response. {ECO:0000305|PubMed:22050533}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015647746.10.0bZIP transcription factor 60
SwissprotQ8LIB30.0BZP60_ORYSJ; bZIP transcription factor 60
TrEMBLA0A0D9X2580.0A0A0D9X258_9ORYZ; Uncharacterized protein
STRINGLPERR07G21050.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP111793035
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40950.14e-65bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Oono Y, et al.
    Analysis of ER stress in developing rice endosperm accumulating beta-amyloid peptide.
    Plant Biotechnol. J., 2010. 8(6): p. 691-718
    [PMID:20331531]
  3. Hu J, et al.
    The Bphi008a gene interacts with the ethylene pathway and transcriptionally regulates MAPK genes in the response of rice to brown planthopper feeding.
    Plant Physiol., 2011. 156(2): p. 856-72
    [PMID:21487048]
  4. Takahashi H,Kawakatsu T,Wakasa Y,Hayashi S,Takaiwa F
    A rice transmembrane bZIP transcription factor, OsbZIP39, regulates the endoplasmic reticulum stress response.
    Plant Cell Physiol., 2012. 53(1): p. 144-53
    [PMID:22084314]
  5. Ohta M, et al.
    Analysis of rice ER-resident J-proteins reveals diversity and functional differentiation of the ER-resident Hsp70 system in plants.
    J. Exp. Bot., 2013. 64(18): p. 5429-41
    [PMID:24153418]
  6. Cheng Q, et al.
    An alternatively spliced heat shock transcription factor, OsHSFA2dI, functions in the heat stress-induced unfolded protein response in rice.
    Plant Biol (Stuttg), 2015. 17(2): p. 419-29
    [PMID:25255693]