PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR03G14050.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family G2-like
Protein Properties Length: 449aa    MW: 49138.5 Da    PI: 6.3477
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR03G14050.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like109.22.2e-34216270155
          G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      k+r+rWtpeLHe+Fv+av++LGGsekAtPk +l+lmkv+gLt++hvkSHLQkYR+
  LPERR03G14050.1 216 KQRMRWTPELHECFVQAVNKLGGSEKATPKGVLKLMKVDGLTIYHVKSHLQKYRT 270
                      79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.291213273IPR017930Myb domain
SuperFamilySSF466891.97E-18214270IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.0E-32214272IPR009057Homeodomain-like
TIGRFAMsTIGR015571.8E-26216270IPR006447Myb domain, plants
PfamPF002492.1E-10218269IPR001005SANT/Myb domain
PfamPF143791.8E-25299346IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    Send to blast
MSSSLPLLPK SLKDIPIPRN PQNILMPGQL PNDSTPLHHS APQSATLHPR ANAVRSSYSA  60
MVGYSSSPID CVSSHERHFM AAPFISQSSN IEVIQSLCNT PNTPGGHTEP TWFPASVNGA  120
PDYMNTITIP DNHTQSATST LTSDVAKQNE WWADIIDDDW KDILDATATD SQSKSMSQPC  180
NSAASQPAFN QSTPSHSGEI CPVTSPPNNN NASSSKQRMR WTPELHECFV QAVNKLGGSE  240
KATPKGVLKL MKVDGLTIYH VKSHLQKYRT ARYKPDLSEG ATQQGKTTEE LSLDLKTSMD  300
LTEALRLQME VQKRLHEQLE IQRKLQLRIE EQGKYLQKMF EKQCKSSTHN VQDPSSGDAE  360
TQSESSNSAD KDSDAALDPT RTGDNPHGIS AKFGENSTNV GANEKTGIEF PDSLATANGG  420
SELPQEKRLA TANVGSELPQ EKRRRVHES
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-30216274260Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-30216274260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-30216274260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-30216274260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-30216274260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-30216274260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-30216274260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-30216274260Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1441445KRRRV
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in phosphate starvation signaling. Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes. Functionally redundant with PHR2 and PHR3 in regulating Pi starvation response and Pi homeostasis. {ECO:0000250|UniProtKB:Q10LZ1}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapLPERR03G14050.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015632603.10.0protein PHOSPHATE STARVATION RESPONSE 1
SwissprotB8ANX90.0PHR1_ORYSI; Protein PHOSPHATE STARVATION RESPONSE 1
TrEMBLA0A0D9VTL50.0A0A0D9VTL5_9ORYZ; Uncharacterized protein
STRINGLPERR03G14050.10.0(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19713789
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.16e-64phosphate starvation response 1