PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR02G10690.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family GeBP
Protein Properties Length: 609aa    MW: 64795.2 Da    PI: 7.3034
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR02G10690.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573348.2e-11212302597
           DUF573   5 rlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfk.vsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                      + w+  De+ +L  l+   +++g++   ++d++++ + +s++ k v+ s + eK+r+LK++++   kk++ g     +ke+d  +++ls+ iWg
  LPERR02G10690.1 212 SRWTTADELKILDILVAHFKSHGTQ--LNVDGIISAAGDSLDRKgVKYSVMYEKVRSLKQRYEATAKKVAGGGA-LPAKEDDLRMYQLSSEIWG 302
                      56**************999999954..6999**********98835567788****************776666.56788899**********8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.3E-16213302IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 609 aa     Download sequence    Send to blast
MAKKRRAPSP PPPPPPEAES SDESSSGDEE DEGKDSPAAA PVPPQKKPSD HGAASSEGEE  60
DDEEEVDSDT DTYAQGFQLR KVGGAPDDEE GEEVGEEEGG SSESEPEDPE PVKKKEAAKK  120
SKSEEAKKKR AADEPAPSGK AKKAKGEKEA ASPPPEPVPS GKSKKAVAKG AAVKKTAAAA  180
AAAEPAPSGK AKKAKVEPDP SPSSKSGKAA VSRWTTADEL KILDILVAHF KSHGTQLNVD  240
GIISAAGDSL DRKGVKYSVM YEKVRSLKQR YEATAKKVAG GGALPAKEDD LRMYQLSSEI  300
WGEDAKEAAA AALASQKNGT PAKSKKGQAK KDKVDGDSKE AATAVNEKGG SLEENKRGKS  360
TKQKTGMDTK IGSSKEVALT ASPKKKGDHK EKLDEEAKGG TSKDTATNAS HKDGKDGSLV  420
GSKRGKADKE KLDGDKGTVM PKETTAIANR DDGTLVVSKK GKADKEKLDG HIESVIPKEA  480
DADTQNGGIL TKEGNNHKDE IDRDAIVTSI RREFVELQSL YPNLASFVNR IEVQHPCGST  540
FKRAFEFISD DKASTMESKI KKQKISEVKM QLRLADTRKD MVGLKIQVSE DLLLGRELRK  600
MMRESGPLD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112129KKKEAAKKSKSEEAKKKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015626761.10.0PREDICTED: neurofilament medium polypeptide
TrEMBLA0A0D9VEY50.0A0A0D9VEY5_9ORYZ; Uncharacterized protein
STRINGLOC_Os02g18660.10.0(Oryza sativa Japonica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP72892737