PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj2g3v2364690.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family WRKY
Protein Properties Length: 260aa    MW: 29626.8 Da    PI: 9.769
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj2g3v2364690.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY58.81.1e-18211252142
                      ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-S CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversa 42 
                      ++DgynW+ Y  K+vk se+ +sYY+Ct+++Cpv+k+vers 
  Lj2g3v2364690.1 211 VEDGYNWKQYEEKNVKRSENQKSYYKCTYPNCPVRKRVERSI 252
                      58**************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.0E-15203252IPR003657WRKY domain
PROSITE profilePS5081115.778206251IPR003657WRKY domain
SuperFamilySSF1182901.83E-15209252IPR003657WRKY domain
SMARTSM007741.6E-13211260IPR003657WRKY domain
PfamPF031066.2E-14212251IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005794Cellular ComponentGolgi apparatus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MPIPISNLIQ KRLWRLVGFM SSVIGLASYA LSSSFKHLFG EWNFFKITVY AVVSFSISSL  60
MLFLKKWKLS RSFLLKVHSG VLVLLLTSFY SFVSDKDVSG KPDMLSLISC AAFAVMSLCL  120
SKQIDLGFGA DLLNFFLGCL TVQLMKINLM LSIFAAIFCY CLMVLRSKLD SQTQIGTLRM  180
EDHVAVDIDA ADQGQRRGNG HRQIQSLTRR VEDGYNWKQY EEKNVKRSEN QKSYYKCTYP  240
NCPVRKRVER SIVGETMETL
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj2g3v2364690.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027333695.11e-128uncharacterized protein LOC113848406
TrEMBLA0A1S2XKG01e-126A0A1S2XKG0_CICAR; uncharacterized protein LOC101503578 isoform X1
STRINGXP_004490676.11e-127(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF147431012
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.13e-18WRKY DNA-binding protein 33