PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj1g3v4048450.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family G2-like
Protein Properties Length: 272aa    MW: 29737.9 Da    PI: 4.9678
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj1g3v4048450.2genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like105.82.5e-334195155
          G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                     k+rlrWt++LH+rFv+a++qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  Lj1g3v4048450.2 41 KQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRL 95
                     79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.0083898IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.1E-324096IPR009057Homeodomain-like
TIGRFAMsTIGR015574.3E-264196IPR006447Myb domain, plants
SuperFamilySSF466893.76E-174195IPR009057Homeodomain-like
PfamPF002491.4E-74394IPR001005SANT/Myb domain
PfamPF143796.3E-24128173IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MVPQKSQGGG GGAEQLANVG VLALGGSAAV RSPTPAGGNG KQRLRWTSDL HDRFVDAITQ  60
LGGPDRATPK GVLRVMGVPG LTIYHVKSHL QKYRLAKYLP DSLVDDSKEE KRTSGDSTSG  120
VDSSPGLQIN DALRMQMEVQ KRLHEQLEVQ KQLQMRIEAQ GKYLQKIIEE QQKLGSTLTV  180
SEMLPLSHDK QNHPQSEPSG SSDALAGTLS PHKRRRIDDG SNDDLAASQD PRETAQKNDC  240
NVGQLDPNLY EDDAGFGYDL ERENDEDEES EQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A6e-244098159Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B6e-244098159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A6e-244098159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C6e-244098159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D6e-244098159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F6e-244098159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H6e-244098159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J6e-244098159Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1212216KRRRI
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Lja.108590.0cell culture| pod| root
Cis-element ? help Back to Top
SourceLink
PlantRegMapLj1g3v4048450.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004493285.11e-157myb family transcription factor PHL7-like isoform X1
RefseqXP_004493286.11e-157myb family transcription factor PHL7-like isoform X2
SwissprotQ9SJW05e-71PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A1S2XR951e-155A0A1S2XR95_CICAR; myb family transcription factor PHL7-like isoform X1
TrEMBLA0A1S2XR991e-155A0A1S2XR99_CICAR; myb family transcription factor PHL7-like isoform X2
STRINGXP_004493285.11e-156(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.13e-66G2-like family protein