PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.1249s0006.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family TCP
Protein Properties Length: 193aa    MW: 21534.3 Da    PI: 6.5265
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.1249s0006.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP96.16.7e-3054124979
                  TCP   9 skihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...ssssaseceaesss 79 
                           ++h kv gRdRRvR++ eca  +F+L++ LG+++d++ti WLl+q+++ai ++tg+   s++++    ++s+ 
  Kalax.1249s0006.1.p  54 PDRHKKVIGRDRRVRMPPECAEMVFQLTRDLGHKSDGETIKWLLKQSEAAIRAATGSgiaSTDPS---VTNSKT 124
                          59*******************************************************55533333...111111 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136920.56753107IPR017887Transcription factor TCP subgroup
PfamPF036341.1E-2555149IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MESWEKRFAG ELERQLEQDQ VNEKEAVAEN PVLPKTTKMV SGKKDHPRRR SNIPDRHKKV  60
IGRDRRVRMP PECAEMVFQL TRDLGHKSDG ETIKWLLKQS EAAIRAATGS GIASTDPSVT  120
NSKTISDSSV VPCLIQPSAG VDLPQIQPPL EPPVTLPPEQ QEKKDQGTSY SNSFWLDVAN  180
MDLEQLGRDH FP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.11e-25TCP family protein