PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.1187s0001.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 425aa    MW: 45738.3 Da    PI: 8.6403
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.1187s0001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.00014191212323
                          ETTTTEEESSHHHHHHHHHH.T CS
              zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                          C++Cg+ Fs ++  + H  + H
  Kalax.1187s0001.1.p 191 CHKCGEQFSEWEAVEAHHLSmH 212
                          *****************98877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280191212IPR007087Zinc finger, C2H2
SuperFamilySSF563994.89E-21214423No hitNo description
Gene3DG3DSA:3.90.228.104.1E-7240422IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
MATVWLSLKN SMHCKSGPTD VHDPKSRTHL STILTKKIGR SGCSRSIANL KDVIHGSKRH  60
LDRPPSCSPR SIGSSDFLNP ITHEVILSNS SCELKITSFA GFQDGTNDGG RWCTSGVGGS  120
TFVGTLRLGT PGPGGKTAIS PFYKNSSWAT PGISPLLSSD KQGSGLGGAQ LSQHWCSFGA  180
DSNSASSSVA CHKCGEQFSE WEAVEAHHLS MHAVTELVEG DSSRKVAEII CRTSCLKAEN  240
PCGRIEKVLK VHNMQKTLAR FEEYREAIKI KANTLPTKHP RCLADGNELL RFYGTTVSCS  300
LGLYGRSSLC IVDKCCVCRI LRNGFSAKKE LKCGIGVFTT STSGRAFEII ETLEDNGPSI  360
RKAVIVCRVI AGRIHKPLEN IQDIAGQSGF DSLAGKVGLY SNREELYLLN PKALLPCFVV  420
ICES*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012459679.10.0PREDICTED: uncharacterized protein LOC105780084
RefseqXP_012459670.10.0PREDICTED: uncharacterized protein LOC105780084
RefseqXP_012459662.10.0PREDICTED: uncharacterized protein LOC105780084
RefseqXP_012459653.10.0PREDICTED: uncharacterized protein LOC105780084
TrEMBLA0A0B0NAN40.0A0A0B0NAN4_G
STRINGGLYMA06G41530.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27240.11e-116C2H2 family protein