PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0246s0027.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 427aa    MW: 46095.4 Da    PI: 9.5165
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0246s0027.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.31.3e-05197219223
                          EETTTTEEESSHHHHHHHHHH.T CS
              zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                           C+ Cg++F+  +nL++H+ + H
  Kalax.0246s0027.1.p 197 ACSQCGEVFPKLENLEHHQAVrH 219
                          6******************9888 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.037196224IPR007087Zinc finger, C2H2
PROSITE patternPS000280196219IPR007087Zinc finger, C2H2
SuperFamilySSF563997.58E-24221424No hitNo description
Gene3DG3DSA:3.90.228.104.0E-13223424IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    Send to blast
MKLAASSSSH SLTSILLSSY CYLLALFFFM ALFTFQQPDP KPNTKKKKKQ KEKQKQQQPS  60
SSSWDQIKNL LHCKQTEVII PGKAPVEKQS GSSKNNNGSS NYSCKSICRF GDVVHGTTRV  120
VHRADNSPEG SSVGRESGRK KIHESSGRVV GNGSGRSVGG GSCGPSGLQF RKLSGCYECH  180
TIVDPSRYPI PRRTVCACSQ CGEVFPKLEN LEHHQAVRHA VSELGPEDSG RNIVEIIFKS  240
SWLKKDTPIC KIERILKVHN TNRTIQRFED CRDAIKLRAS ASTKKNPRCA ADGNELLRFH  300
CTTLSCSLGS RNSSALCAAI PGCGICTLIR HGFQPANGGG VFTAAGSGRA HDGVEGKEGR  360
RAMVVCRVVA GRVRREGAAE PEEGGCGSGF DSVAGRAGTY SDLEELTVFN PRAILPCFVV  420
IYKSAD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015871156.11e-174PREDICTED: uncharacterized protein LOC107408289
RefseqXP_015902946.11e-174PREDICTED: uncharacterized protein LOC107435832
TrEMBLW9RZ951e-172W9RZ95_9R
STRINGVIT_18s0001g14130.t011e-172(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-126C2H2-like zinc finger protein