PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0073s0074.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family TCP
Protein Properties Length: 337aa    MW: 35727 Da    PI: 8.2951
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0073s0074.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1103.5e-3485175291
                  TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgka 90 
                          a+++++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++t+ WLl+ a++ai e+tgt++ +a ++   ++ +  + +sssg++
  Kalax.0073s0074.1.p  85 ATGRRSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIYEATGTGTVPAIAVsVGGTLKIPTTTSSSGES 174
                          67899***********************************************************88888444322222222222222222 PP

                  TCP  91 a 91 
                          +
  Kalax.0073s0074.1.p 175 S 175
                          2 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036347.3E-2890170IPR005333Transcription factor, TCP
PROSITE profilePS5136925.20591145IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MNHHHRQIDP ENDEDDDGAD ASDLSKSTGA KNNGCSNGDS KLYPETLSFR SHLLKQEPSD  60
SDHFRQHSRS FGMVPVPMQM PVTVATGRRS TKDRHTKVEG RGRRIRIPAT CAARIFQLTR  120
ELGHKSDGET VRWLLEHAEQ AIYEATGTGT VPAIAVSVGG TLKIPTTTSS SGESSVKKMK  180
RPSTSEFYDV SVSSGLRHVA MSPIPQGLVP IWAVGNPPGM NAVAAGGFWM IRQPPAMPAA  240
TSSQPQLWTI SPSVTPVFNM AGGPDPADVI APSSALDSSL VGASKSSKQL TTMAPSHSSS  300
SSASKTQMAV EIFDRGEALQ LQLQLMGGSS SPHSSS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007211057.15e-94transcription factor TCP9
RefseqXP_028762754.17e-94LOW QUALITY PROTEIN: transcription factor TCP9-like
TrEMBLM5WG461e-92M5WG46_PRUPE; Uncharacterized protein
STRINGEMJ122562e-93(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45680.15e-57TCP family protein