PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0034s0149.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 131aa    MW: 14411.8 Da    PI: 8.4976
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0034s0149.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.97.6e-054365123
                         EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                         ++C++C + F ++  L  H++ H
  Kalax.0034s0149.1.p 43 FSCNYCQRKFYSSQALGGHQNAH 65
                         89******************988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.31E-64170No hitNo description
PROSITE profilePS5015711.0944370IPR007087Zinc finger, C2H2
PROSITE patternPS0002804565IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    Send to blast
MSYYHHSSDN SINTSLHLSP PNLRERSSSS GHPSHDNNPL RVFSCNYCQR KFYSSQALGG  60
HQNAHKLERT LAKKSRELFS PGSSGANRGT ECDDGDLVRR FHDGAGMVNV YGGSSRQDAE  120
FSPLDLSLRL *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010099959.11e-23Zinc finger protein 2
SwissprotQ392613e-23ZFP2_ARATH; Zinc finger protein 2
TrEMBLW9S0B31e-23W9S0B3_9R
STRINGBra020437.1-P6e-21(Brassica rapa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.12e-24zinc finger protein 2