PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0004s0025.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family SRS
Protein Properties Length: 381aa    MW: 42414.9 Da    PI: 8.544
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0004s0025.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF70226.12.5e-085896542
               DUF702  5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathv.kst 42
                         + +C +CGn a+  C ++ C+ CC      C  hv k t
  Kaladp0004s0025.2.p 58 KPKCIQCGNVARSRCPYQSCKSCCSKAQNPCYIHVlKQT 96
                         568*******************************95444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF051421.2E-560100IPR007818Protein of unknown function DUF702
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MATPSPSQSI NSTDTGVSQP AASAASASAS APPSTAPISR LHRVDAPAGP KTLRGLNKPK  60
CIQCGNVARS RCPYQSCKSC CSKAQNPCYI HVLKQTATVP DKAPSAGSPK VDEQSNEPSP  120
SGPSHRVPSY RQLSSQFSQF NNLNLQQSRK PLTRKEAFAI NEWRFAKLKE YRERDIEAEN  180
DAFDRYIQNI RLLEDVLSAE ELYADELIES NLEAVAEESN EVVVSRLKLR LKSNSVKAFN  240
AKDKLRDIVD KGLRQFLKRE LNVGDYDIQD FQNQKRRAKS LRDDRARALN DLLDKMNKAR  300
TMEDLEACME LKSQLFKQLP KKHQMELDPG MTSEGKATYE AIPDQQASIS IPKLVKTVNI  360
DQETLSSIDL HFASLEHIGL *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009369678.11e-123PREDICTED: uncharacterized protein LOC103959065
TrEMBLA0A315A1E81e-127A0A315A1E8_PRUYE; Uncharacterized protein
STRINGXP_009369678.11e-123(Pyrus x bretschneideri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32730.17e-70